MANIFEST.in
README.rst
setup.py
ASEkit/.aseQTL.py.swp
ASEkit/__init__.py
ASEkit/aseCalling.py
ASEkit/aseFilter.py
ASEkit/aseQTL.py
ASEkit/aseTrait.py
ASEkit/test.py
ASEkit.egg-info/PKG-INFO
ASEkit.egg-info/SOURCES.txt
ASEkit.egg-info/dependency_links.txt
ASEkit.egg-info/entry_points.txt
ASEkit.egg-info/requires.txt
ASEkit.egg-info/top_level.txt
ASEkit/__pycache__/aseQTL.cpython-35.pyc
ASEkit/aseTrait/ASEassociateTrait.r
ASEkit/example.fromat.data/aseCalling/example.sh
ASEkit/example.fromat.data/aseCalling/sample.info.txt
ASEkit/example.fromat.data/aseCalling/RNAseq/WGC019768R_combined_filtered_R1.fastq.gz
ASEkit/example.fromat.data/aseCalling/RNAseq/WGC019768R_combined_filtered_R2.fastq.gz
ASEkit/example.fromat.data/aseCalling/RNAseq/WGC019769R_combined_filtered_R1.fastq.gz
ASEkit/example.fromat.data/aseCalling/RNAseq/WGC019769R_combined_filtered_R2.fastq.gz
ASEkit/example.fromat.data/aseCalling/VCFfile/WGC021959D.het.filter.vcf
ASEkit/example.fromat.data/aseCalling/VCFfile/WGC021960D.het.filter.vcf
ASEkit/example.fromat.data/aseFilter/ase.site.merge.txt
ASEkit/example.fromat.data/aseFilter/example.sh
ASEkit/example.fromat.data/aseFilter/populatio.ase.txt
ASEkit/example.fromat.data/aseFilter/sample.info.txt
ASEkit/example.fromat.data/aseFilter/example.data/WGC019768R/WGC019768R.allelic_counts.txt
ASEkit/example.fromat.data/aseFilter/example.data/WGC019768R/WGC019768R.filter.txt
ASEkit/example.fromat.data/aseFilter/example.data/WGC019769R/WGC019769R.allelic_counts.txt
ASEkit/example.fromat.data/aseFilter/example.data/WGC019769R/WGC019769R.filter.txt
ASEkit/example.fromat.data/aseQTL/aseQTL.example.sh
ASEkit/example.fromat.data/aseQTL/population.ase.test.txt
ASEkit/example.fromat.data/aseQTL/vcf_filepath.txt
ASEkit/example.fromat.data/aseQTL/vcf/chr1.test.vcf.gz
ASEkit/example.fromat.data/aseTrait/pheno.txt
ASEkit/example.fromat.data/aseTrait/population.ase.txt
ASEkit/old/ASEassociateTrait.r
ASEkit/old/aseQTL.py
ASEkit/src/README.md
ASEkit/src/__init__.py
ASEkit/src/call_read_variant_map.py
ASEkit/src/phaser.py
ASEkit/src/read_variant_map.c
ASEkit/src/read_variant_map.py
ASEkit/src/read_variant_map.so
ASEkit/src/setup.py
ASEkit/src/.git/objects/pack/pack-7b92e54891cf5dbeade2ae710ac163e982fa88f0.idx
ASEkit/src/.git/objects/pack/pack-7b92e54891cf5dbeade2ae710ac163e982fa88f0.pack
ASEkit/src/build/temp.linux-x86_64-2.7/__init__.py
ASEkit/src/build/temp.linux-x86_64-2.7/read_variant_map.o