LICENSE
README.md
pyproject.toml
clew/__init__.py
clew/__main__.py
clew/dashboard.py
clew/demo.py
clew/evidence.py
clew/extract_from_lineage_store.py
clew/extract_from_rocrate.py
clew/extract_lineage.py
clew/gate.py
clew/impact.py
clew/logbook.py
clew/mcp_server.py
clew/rulebook.py
clew/stitch_graphs.py
clew/core/__init__.py
clew/core/blast_radius.py
clew/core/bundlestore.py
clew/core/contribution.py
clew/core/eventlog.py
clew/core/evidence.py
clew/core/gate.py
clew/core/policy.py
clew/core/query.py
clew/data/assertions.json
clew/data/donors.csv
clew/data/gate-policy.example.json
clew/data/graph5.json
clew/data/graph_chain.json
clew/data/graph_da.json
clew/data/graph_rna.json
clew/data/graph_vr.json
clew/data/samplesheets/rnaseq_yeast.csv
clew/data/samplesheets/viralrecon_coguk.csv
clew/domains/__init__.py
clew/domains/nfcore.py
clew/domains/rnaseq.py
clew/domains/sarek.py
clew/domains/viralrecon.py
clew_lineage.egg-info/PKG-INFO
clew_lineage.egg-info/SOURCES.txt
clew_lineage.egg-info/dependency_links.txt
clew_lineage.egg-info/entry_points.txt
clew_lineage.egg-info/requires.txt
clew_lineage.egg-info/top_level.txt
tests/test_blast_radius.py
tests/test_contribution.py
tests/test_core_boundary.py
tests/test_dashboard.py
tests/test_eventlog.py
tests/test_eventlog_postgres.py
tests/test_evidence.py
tests/test_extractor.py
tests/test_gate.py
tests/test_graph5_regression.py
tests/test_graph_chain_regression.py
tests/test_graph_rna_regression.py
tests/test_graph_vr_regression.py
tests/test_lineage_store.py
tests/test_mcp_server.py
tests/test_mode.py
tests/test_plan_json.py
tests/test_policy.py
tests/test_query.py
tests/test_rocrate.py
tests/test_sarek.py