Metadata-Version: 2.1
Name: PyMSQ
Version: 0.1
Summary: A Python package for estimating Mendelian sampling-related quantities
Home-page: https://github.com/aromemusa/PyMSQ
Author: Abdulraheem Musa, Norbert Reinsch
Author-email: musa@fbn-dummerstorf.de, reinsch@fbn-dummerstorf.de
License: MIT
Download-URL: https://github.com/aromemusa/PyMSQ/blob/main/dist/PyMSQ-0.1.tar.gz
Description: # PyMSQ: documentation
        
        PyMSQ is a python package for estimating Mendelian sampling-related quantities. PyMSQ is composed of one module [`msq`](./docs_msq.md) for simplicity. 
        
        Include the following code in your python file to use its functions:
        
        `from PyMSQ import msq`
        
        PyMSQ can be installed using `pip` with the command
        
        `pip install PyMSQ`
        
        This documentation describes the main functions of the PyMSQ package:
        * Derivation of population-specific covariance matrices reflecting within-family linkage disequilibrium
        * Estimation of Mendelian sampling variance for traits and aggregate genotype for multiple traits, as well as their covariances
        * Derivation of similarity matrices based on Mendelian sampling values between individuals
        * Estimation of selection criteria for genetic evaluation of plants and animals
        
        A tutorial on how to use PyMSQ's functions can be found [`here`](./Illustration_of_PyMSQ_functions.md).
        
Keywords: Mendelian sampling,variance,covariance,similarity,selection,haplotype diversity
Platform: UNKNOWN
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Education
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Requires-Python: >=3.4
Description-Content-Type: text/markdown
