torch>=2.8.0
numpy<3.0,>=1.24

[all]
clearml>=1.10.0rc0
einops
filelock<3.12.0
fire
gdown>=4.7.3
h5py
huggingface_hub
itk>=5.2
jsonschema
lmdb
lpips==0.1.4
matplotlib>=3.6.3
mlflow>=3.15.2
nibabel
ninja
nvidia-ml-py
onnx_graphsurgeon
onnx>=1.13.0
onnxscript
openslide-bin
openslide-python
optuna
pandas
pillow!=8.3.0
polygraphy
psutil
pyamg<5.3.0,>=5.0.0
pybind11
pydicom
pynrrd
pytorch-ignite
pyyaml
requests
scikit-image>=0.19.0
scipy>=1.12.0
tensorboard>=2.12.0
tensorboardX
torchio
torchvision
tqdm>=4.47.0
transformers>=5.5.0
zarr

[all:platform_system == "Linux" and "arm" not in platform_machine and "aarch" not in platform_machine]
nni

[all:platform_system == "Linux" and python_version <= "3.10"]
cucim-cu12

[all:platform_system == "Linux" and python_version >= "3.11"]
cucim-cu13

[all:platform_system == "Linux" or platform_system == "Darwin"]
imagecodecs
tifffile

[all:python_version <= "3.10"]
onnxruntime

[clearml]
clearml>=1.10.0rc0

[cucim]

[cucim:platform_system == "Linux" and python_version <= "3.10"]
cucim-cu12

[cucim:platform_system == "Linux" and python_version >= "3.11"]
cucim-cu13

[cupy]
cupy-cuda13x!=14.1.0

[einops]
einops

[fire]
fire

[gdown]
gdown>=4.7.3

[h5py]
h5py

[huggingface_hub]
huggingface_hub

[hyena]
nvsubquadratic>=0.1.1
omegaconf
einops

[ignite]
pytorch-ignite

[imagecodecs]

[imagecodecs:platform_system == "Linux" or platform_system == "Darwin"]
imagecodecs

[itk]
itk>=5.2

[jsonschema]
jsonschema

[lmdb]
lmdb

[lpips]
lpips==0.1.4

[matplotlib]
matplotlib>=3.6.3

[mlflow]
mlflow>=3.15.2

[nibabel]
nibabel

[nni]
filelock<3.12.0
typeguard<3

[nni:platform_system == "Linux" and "arm" not in platform_machine and "aarch" not in platform_machine]
nni

[onnx]
onnx>=1.13.0
onnx_graphsurgeon
onnxscript

[onnx:python_version <= "3.10"]
onnxruntime

[openslide]
openslide-python
openslide-bin

[optuna]
optuna

[pandas]
pandas

[pillow]
pillow!=8.3.0

[polygraphy]
polygraphy

[psutil]
psutil

[pyamg]
pyamg<5.3.0,>=5.0.0

[pybind11]
pybind11

[pydicom]
pydicom

[pynrrd]
pynrrd

[pynvml]
nvidia-ml-py

[pyyaml]
pyyaml

[requests]
requests

[scipy]
scipy>=1.12.0

[skimage]
scikit-image>=0.19.0

[tensorboard]
tensorboard>=2.12.0

[tensorboardX]
tensorboardX

[testing]
black>=26.5.1
coverage>=5.5
isort>9.0.0
mccabe
packaging
parameterized
pep8-naming
pre-commit
pycodestyle
pyflakes
pyrefly>=1.0.0
ruff>=0.16.5
tomli
types-PyYAML
types-setuptools

[tifffile]

[tifffile:platform_system == "Linux" or platform_system == "Darwin"]
tifffile

[torchio]
torchio

[torchvision]
torchvision

[tqdm]
tqdm>=4.47.0

[transformers]
transformers>=5.5.0

[zarr]
zarr
