// Created by libAntimony v2.13.0
function t_g(r, x)
  r*x;
end

t_g is "t-g"

function t_k(c, y, z)
  c*y*z;
end

t_k is "t-k"

function inft_d(y)
  y;
end

inft_d is "inft-d"

function t_d(r, x)
  r*x*x;
end

t_d is "t-d"

function t_cross(r, x, y)
  r*x*y;
end

t_cross is "t-cross"

function v_rep(b, y)
  b*y;
end

v_rep is "v-rep"

function infection_0(a, x, v)
  a*x*v;
end

infection_0 is "infection"

function v_k(d, v, z)
  d*v*z;
end

v_k is "v-k"

function v_clear(e, v)
  e*v;
end

v_clear is "v-clear"

function imm_s(m, y, z)
  m*y*z;
end

imm_s is "imm-s"

function imm_d(n, z)
  n*z;
end

imm_d is "imm-d"


model *Phan2017___innate_immune_in_oncolytic_virotherapy()

  // Compartments and Species:
  compartment tumor_microenvironment;
  species x in tumor_microenvironment, y in tumor_microenvironment, v in tumor_microenvironment;
  species z in tumor_microenvironment;

  // Reactions:
  tumor_growth:  => x; tumor_microenvironment*t_g(r, x);
  tumor_death: x => ; tumor_microenvironment*t_d(r, x);
  tumor_cross_infection: x => ; tumor_microenvironment*t_cross(r, x, y);
  infected_tumor_killing: y => ; tumor_microenvironment*t_k(c, y, z);
  infected_tumor_death: y => ; tumor_microenvironment*inft_d(y);
  virus_multiplication_in_infected_tumor:  => v; tumor_microenvironment*v_rep(b, y);
  virus_clearing: v => ; tumor_microenvironment*v_clear(e, v);
  virus_killing_by_immune: v => ; tumor_microenvironment*v_k(d, v, z);
  immune_stimulation:  => z; tumor_microenvironment*imm_s(m, y, z);
  immune_cell_death: z => ; tumor_microenvironment*imm_d(n, z);
  infection: x + v => y; tumor_microenvironment*infection_0(a, x, v);

  // Species initializations:
  x = 0.99;
  x has substance_per_volume;
  y = 0.01;
  y has substance_per_volume;
  v = 0.01;
  v has substance_per_volume;
  z = 0.01;
  z has substance_per_volume;

  // Compartment initializations:
  tumor_microenvironment = 1;
  tumor_microenvironment has volume;

  // Variable initializations:
  r = 0.36;
  r has unit_0;
  a = 0.11;
  a has unit_0;
  c = 0.48;
  c has unit_0;
  d = 0.16;
  d has unit_0;
  e = 0.2;
  e has unit_0;
  m = 0.6;
  m has unit_0;
  n = 0.036;
  n has unit_0;
  b = 9;
  b has unit_0;

  // Other declarations:
  const tumor_microenvironment, r, a, c, d, e, m, n, b;

  // Unit definitions:
  unit length = metre;
  unit area = metre^2;
  unit volume = 1e-3 litre;
  unit time_unit = time_unit;
  unit substance = 1e-3 mole;
  unit unit_0 = 1 / dimensionless^-0;
  unit extent = substance;
  unit substance_per_volume = 1e-3 mole / 1e-3 litre;

  // Display Names:
  time_unit is "time";
  unit_0 is "1";
  tumor_microenvironment is "tumor microenvironment";
  tumor_growth is "tumor growth";
  tumor_death is "tumor death";
  tumor_cross_infection is "tumor cross-infection";
  infected_tumor_killing is "infected tumor killing";
  infected_tumor_death is "infected tumor death";
  virus_multiplication_in_infected_tumor is "virus multiplication in infected tumor";
  virus_clearing is "virus clearing";
  virus_killing_by_immune is "virus killing by immune";
  immune_stimulation is "immune stimulation";
  immune_cell_death is "immune cell death";

  // CV terms:
  tumor_microenvironment hypernym "http://identifiers.org/ncit/C94498"
  x hypernym "http://identifiers.org/cl/CL:0001063"
  y hypernym "http://identifiers.org/cl/CL:0001063"
  v hypernym "http://identifiers.org/ncit/C717"
  z hypernym "http://identifiers.org/ncit/C28241"
  r hypernym "http://identifiers.org/sbo/SBO:0000610"
  a hypernym "http://identifiers.org/ncit/C94967"
  c hypernym "http://identifiers.org/ncit/C94967"
  d hypernym "http://identifiers.org/ncit/C94967"
  e hypernym "http://identifiers.org/ncit/C94967"
  m hypernym "http://identifiers.org/sbo/SBO:0000610"
  n hypernym "http://identifiers.org/ncit/C94967"
  b propertyBearer "http://identifiers.org/go/GO:0019058"
  tumor_growth hypernym "http://identifiers.org/go/GO:0008283"
  tumor_growth hypernym "http://identifiers.org/sbo/SBO:0000393"
  tumor_death hypernym "http://identifiers.org/go/GO:0008219"
  tumor_death hypernym "http://identifiers.org/sbo/SBO:0000179"
  tumor_cross_infection hypernym "http://identifiers.org/sbo/SBO:0000179"
  infected_tumor_killing hypernym "http://identifiers.org/sbo/SBO:0000179"
  infected_tumor_killing hypernym "http://identifiers.org/go/GO:0002418"
  infected_tumor_death hypernym "http://identifiers.org/sbo/SBO:0000179"
  infected_tumor_death hypernym "http://identifiers.org/go/GO:0008219"
  virus_multiplication_in_infected_tumor hypernym "http://identifiers.org/sbo/SBO:0000393"
  virus_multiplication_in_infected_tumor hypernym "http://identifiers.org/ncit/C94345"
  virus_clearing hypernym "http://identifiers.org/sbo/SBO:0000179"
  virus_killing_by_immune hypernym "http://identifiers.org/sbo/SBO:0000179"
  virus_killing_by_immune hypernym "http://identifiers.org/go/GO:0006955"
  immune_stimulation hypernym "http://identifiers.org/sbo/SBO:0000393"
  immune_stimulation hypernym "http://identifiers.org/go/GO:0070661"
  immune_cell_death hypernym "http://identifiers.org/go/GO:0008219"
  immune_cell_death hypernym "http://identifiers.org/sbo/SBO:0000179"
  infection hypernym "http://identifiers.org/ncit/C3439"
end

Phan2017___innate_immune_in_oncolytic_virotherapy is "Phan2017 - innate immune in oncolytic virotherapy"

Phan2017___innate_immune_in_oncolytic_virotherapy description "http://identifiers.org/pubmed/29379572"
Phan2017___innate_immune_in_oncolytic_virotherapy model_entity_is "http://identifiers.org/biomodels.db/MODEL1907110001",
                                                                  "http://identifiers.org/biomodels.db/BIOMD0000000748"
Phan2017___innate_immune_in_oncolytic_virotherapy hypernym "http://identifiers.org/ncit/C62713"
Phan2017___innate_immune_in_oncolytic_virotherapy property "http://identifiers.org/mamo/MAMO_0000046"
Phan2017___innate_immune_in_oncolytic_virotherapy taxon "http://identifiers.org/taxonomy/9606"
