// Created by libAntimony v2.13.0
model *Schliemann2011_TNF_ProAntiApoptosis()

  // Compartments and Species:
  compartment cytoplasm, extracellular, nucleus;
  substanceOnly species TNFR_E in extracellular, TNF_E in extracellular, TNF_TNFR_E in extracellular;
  substanceOnly species TNFR in cytoplasm, RIP in cytoplasm, TRADD in cytoplasm;
  substanceOnly species TRAF2 in cytoplasm, FADD in cytoplasm, TNF_TNFR_TRADD in cytoplasm;
  substanceOnly species TNFRC1 in cytoplasm, TNFRCint1 in cytoplasm, TNFRCint2 in cytoplasm;
  substanceOnly species TNFRCint3 in cytoplasm, TNFRC2 in cytoplasm, FLIP in cytoplasm;
  substanceOnly species TNFRC2_FLIP in cytoplasm, TNFRC2_pCasp8 in cytoplasm;
  substanceOnly species TNFRC2_FLIP_FLIP in cytoplasm, TNFRC2_pCasp8_pCasp8 in cytoplasm;
  substanceOnly species TNFRC2_FLIP_pCasp8 in cytoplasm, TNFRC2_FLIP_pCasp8_RIP_TRAF2 in cytoplasm;
  substanceOnly species IKK in cytoplasm, IKKa in cytoplasm, A20 in cytoplasm;
  substanceOnly species NFkB in cytoplasm, IkBa in cytoplasm, IkBa_NFkB in cytoplasm;
  substanceOnly species PIkBa in cytoplasm, NFkB_N in nucleus, IkBa_N in nucleus;
  substanceOnly species IkBa_NFkB_N in nucleus, A20_mRNA in nucleus, IkBa_mRNA in nucleus;
  substanceOnly species XIAP_mRNA in nucleus, FLIP_mRNA in nucleus, BAR in cytoplasm;
  substanceOnly species XIAP in cytoplasm, pCasp8 in cytoplasm, pCasp3 in cytoplasm;
  substanceOnly species pCasp6 in cytoplasm, Casp8 in cytoplasm, Casp3 in cytoplasm;
  substanceOnly species Casp6 in cytoplasm, BAR_Casp8 in cytoplasm, XIAP_Casp3 in cytoplasm;
  substanceOnly species PARP in cytoplasm, cPARP in cytoplasm;

  // Reactions:
  J1: TNFR => TNFR_E; J1_ka_1*TNFR;
  J2:  => TNFR; J2_ka_2;
  J3: TNFR_E => ; J3_ka_3*TNFR_E;
  J4:  -> RIP; J4_ka_4 - J4_kd_4*RIP;
  J5:  -> TRADD; J5_ka_5 - J5_kd_5*TRADD;
  J6:  -> TRAF2; J6_ka_6 - J6_kd_6*TRAF2;
  J7:  -> FADD; J7_ka_7 - J7_kd_7*FADD;
  J8: TNF_TNFR_E => ; J8_ka_8*TNF_TNFR_E;
  J9: TNF_TNFR_TRADD => ; J9_ka_9*TNF_TNFR_TRADD;
  J10: TNFRC1 => ; J10_ka_10*TNFRC1;
  J11: TNFRC2 => ; J11_ka_11*TNFRC2;
  J12: TNFRC2_FLIP => ; J12_ka_12*TNFRC2_FLIP;
  J13: TNFRC2_FLIP_FLIP => ; J13_ka_13*TNFRC2_FLIP_FLIP;
  J14: TNFRC2_pCasp8 => ; J14_ka_14*TNFRC2_pCasp8;
  J15: TNFRC2_pCasp8_pCasp8 => ; J15_ka_15*TNFRC2_pCasp8_pCasp8;
  J16: TNFRC2_FLIP_pCasp8 => ; J16_ka_16*TNFRC2_FLIP_pCasp8;
  J17: TNFRC2_FLIP_pCasp8_RIP_TRAF2 => ; J17_ka_17*TNFRC2_FLIP_pCasp8_RIP_TRAF2;
  J18: TNFR_E + TNF_E -> TNF_TNFR_E; J18_ka_18*TNFR_E*TNF_E - J18_kd_18*TNF_TNFR_E;
  J19: TNF_TNFR_E + TRADD => TNF_TNFR_TRADD; J19_ka_19*TNF_TNFR_E*TRADD;
  J20: RIP + TRAF2 + TNF_TNFR_TRADD => TNFRC1; J20_ka_20*RIP*TRAF2*TNF_TNFR_TRADD;
  J21: TNFRC1 => TNFRCint1; J21_ka_21*TNFRC1;
  J22: TNFRCint1 => RIP + TRAF2 + TNFRCint2; J22_ka_22*TNFRCint1;
  J23: 2 FADD + TNFRCint2 => TNFRCint3; J23_ka_23*FADD^2*TNFRCint2;
  J24: TNFRCint3 => TNFRC2; J24_ka_24*TNFRCint3;
  J25: TNFRC2 + FLIP => TNFRC2_FLIP; J25_ka_25*TNFRC2*FLIP;
  J26: FLIP + TNFRC2_FLIP => TNFRC2_FLIP_FLIP; J26_ka_26*FLIP*TNFRC2_FLIP;
  J27: TNFRC2 + pCasp8 => TNFRC2_pCasp8; J27_ka_27*TNFRC2*pCasp8;
  J28: TNFRC2_pCasp8 + pCasp8 => TNFRC2_pCasp8_pCasp8; J28_ka_28*TNFRC2_pCasp8*pCasp8;
  J29: TNFRC2_pCasp8_pCasp8 => TNFRC2 + Casp8; J29_ka_29*TNFRC2_pCasp8_pCasp8;
  J30: FLIP + TNFRC2_pCasp8 => TNFRC2_FLIP_pCasp8; J30_ka_30*FLIP*TNFRC2_pCasp8;
  J31: TNFRC2_FLIP + pCasp8 => TNFRC2_FLIP_pCasp8; J31_ka_31*TNFRC2_FLIP*pCasp8;
  J32: TNFRC2_FLIP_pCasp8 => TNFRC2 + Casp8; J32_ka_32*TNFRC2_FLIP_pCasp8;
  J33: RIP + TRAF2 + TNFRC2_FLIP_pCasp8 => TNFRC2_FLIP_pCasp8_RIP_TRAF2; J33_ka_33*RIP*TRAF2*TNFRC2_FLIP_pCasp8;
  J34: IKK => IKKa; J34_ka_34*TNFRC2_FLIP_pCasp8_RIP_TRAF2*IKK;
  J35:  -> IKK; J35_ka_35 - J35_kd_35*IKK;
  J36:  -> NFkB; J36_ka_36 - J36_kd_36*NFkB;
  J37:  -> FLIP; J37_ka_37 - J37_kd_37*FLIP;
  J38:  -> XIAP; J38_ka_38 - J38_kd_38*XIAP;
  J39:  -> A20; J39_ka_39 - J39_kd_39*A20;
  J40: IKKa => ; J40_ka_40*IKKa;
  J41: IkBa_NFkB => ; J41_ka_41*IkBa_NFkB;
  J42: NFkB_N => ; J42_ka_42*NFkB_N;
  J43: IkBa_mRNA => ; J43_ka_43*IkBa_mRNA;
  J44: IkBa => ; J44_ka_44*IkBa;
  J45: IkBa_N => ; J45_ka_45*IkBa_N;
  J46: IkBa_NFkB_N => ; J46_ka_46*IkBa_NFkB_N;
  J47: PIkBa => ; J47_ka_47*PIkBa;
  J48: A20_mRNA => ; J48_ka_48*A20_mRNA;
  J49: XIAP_mRNA => ; J49_ka_49*XIAP_mRNA;
  J50: FLIP_mRNA => ; J50_ka_50*FLIP_mRNA;
  J51: IKK => IKKa; J51_ka_51*TNFRC1*IKK;
  J52: IKKa => IKK; J52_ka_52*IKKa;
  J53: TNFRC1 => TRAF2 + TNF_TNFR_TRADD; J53_ka_53*TNFRC1*A20;
  J54: NFkB + IkBa => IkBa_NFkB; J54_ka_54*NFkB*IkBa;
  J55: IkBa_NFkB => NFkB + PIkBa; J55_ka_55*IKKa*IkBa_NFkB;
  J56: NFkB => NFkB_N; J56_ka_56*NFkB;
  J57:  => IkBa_mRNA; J57_ka_57*NFkB_N;
  J58:  => IkBa; J58_ka_58*IkBa_mRNA;
  J59: IkBa -> IkBa_N; J59_ka_59*IkBa - J59_kd_59*IkBa_N;
  J60: NFkB_N + IkBa_N => IkBa_NFkB_N; J60_ka_60*NFkB_N*IkBa_N;
  J61: IkBa_NFkB_N => IkBa_NFkB; J61_ka_61*IkBa_NFkB_N;
  J62:  => A20_mRNA; J62_ka_62*NFkB_N;
  J63:  => A20; J63_ka_63*A20_mRNA;
  J64:  => XIAP_mRNA; J64_ka_64*NFkB_N;
  J65:  => XIAP; J65_ka_65*XIAP_mRNA;
  J66:  => FLIP_mRNA; J66_ka_66*NFkB_N;
  J67:  => FLIP; J67_ka_67*FLIP_mRNA;
  J68:  -> pCasp8; J68_ka_68 - J68_kd_68*pCasp8;
  J69:  -> pCasp3; J69_ka_69 - J69_kd_69*pCasp3;
  J70:  -> pCasp6; J70_ka_70 - J70_kd_70*pCasp6;
  J71: Casp8 => ; J71_ka_71*Casp8;
  J72: Casp3 => ; J72_ka_72*Casp3;
  J73: Casp6 => ; J73_ka_73*Casp6;
  J74: XIAP_Casp3 => ; J74_ka_74*XIAP_Casp3;
  J75:  -> BAR; J75_ka_75 - J75_kd_75*BAR;
  J76: BAR_Casp8 => ; J76_ka_76*BAR_Casp8;
  J77: PARP -> ; J77_ka_77*PARP - J77_kd_77;
  J78: cPARP => ; J78_ka_78*cPARP;
  J79: pCasp3 => Casp3; J79_ka_79*pCasp3*Casp8;
  J80: pCasp6 => Casp6; J80_ka_80*pCasp6*Casp3;
  J81: pCasp8 => Casp8; J81_ka_81*pCasp8*Casp6;
  J82: XIAP + Casp3 -> XIAP_Casp3; J82_ka_82*XIAP*Casp3 - J82_kd_82*XIAP_Casp3;
  J83: XIAP => ; J83_ka_83*XIAP*Casp3;
  J84: XIAP_Casp3 => XIAP; J84_ka_84*XIAP_Casp3;
  J85: RIP => ; J85_ka_85*RIP*Casp3;
  J86: FLIP => ; J86_ka_86*FLIP*Casp3;
  J87: PARP => cPARP; J87_ka_87*Casp3*PARP;
  J88: BAR + Casp8 -> BAR_Casp8; J88_ka_88*BAR*Casp8 - J88_kd_88*BAR_Casp8;

  // Species initializations:
  TNFR_E = 0.005/extracellular;
  TNFR_E has a_mole_per_pl;
  TNF_E = 0.2688/extracellular;
  TNF_E has a_mole_per_pl;
  TNF_TNFR_E = 0;
  TNF_TNFR_E has a_mole_per_pl;
  TNFR = 0.00028/cytoplasm;
  TNFR has a_mole_per_pl;
  RIP = 0.20256/cytoplasm;
  RIP has a_mole_per_pl;
  TRADD = 0.29344/cytoplasm;
  TRADD has a_mole_per_pl;
  TRAF2 = 0.33056/cytoplasm;
  TRAF2 has a_mole_per_pl;
  FADD = 0.30944/cytoplasm;
  FADD has a_mole_per_pl;
  TNF_TNFR_TRADD = 0;
  TNF_TNFR_TRADD has a_mole_per_pl;
  TNFRC1 = 0;
  TNFRC1 has a_mole_per_pl;
  TNFRCint1 = 0;
  TNFRCint1 has a_mole_per_pl;
  TNFRCint2 = 0;
  TNFRCint2 has a_mole_per_pl;
  TNFRCint3 = 0;
  TNFRCint3 has a_mole_per_pl;
  TNFRC2 = 0;
  TNFRC2 has a_mole_per_pl;
  FLIP = 0.0320472/cytoplasm;
  FLIP has a_mole_per_pl;
  TNFRC2_FLIP = 0;
  TNFRC2_FLIP has a_mole_per_pl;
  TNFRC2_pCasp8 = 0;
  TNFRC2_pCasp8 has a_mole_per_pl;
  TNFRC2_FLIP_FLIP = 0;
  TNFRC2_FLIP_FLIP has a_mole_per_pl;
  TNFRC2_pCasp8_pCasp8 = 0;
  TNFRC2_pCasp8_pCasp8 has a_mole_per_pl;
  TNFRC2_FLIP_pCasp8 = 0;
  TNFRC2_FLIP_pCasp8 has a_mole_per_pl;
  TNFRC2_FLIP_pCasp8_RIP_TRAF2 = 0;
  TNFRC2_FLIP_pCasp8_RIP_TRAF2 has a_mole_per_pl;
  IKK = 0.64/cytoplasm;
  IKK has a_mole_per_pl;
  IKKa = 0;
  IKKa has a_mole_per_pl;
  A20 = 0.104434/cytoplasm;
  A20 has a_mole_per_pl;
  NFkB = 0.000115365/cytoplasm;
  NFkB has a_mole_per_pl;
  IkBa = 0.00101518/cytoplasm;
  IkBa has a_mole_per_pl;
  IkBa_NFkB = 0.0151032/cytoplasm;
  IkBa_NFkB has a_mole_per_pl;
  PIkBa = 0;
  PIkBa has a_mole_per_pl;
  NFkB_N = 0.000691431/nucleus;
  NFkB_N has a_mole_per_pl;
  IkBa_N = 0.0013839/nucleus;
  IkBa_N has a_mole_per_pl;
  IkBa_NFkB_N = 9.00189e-05/nucleus;
  IkBa_NFkB_N has a_mole_per_pl;
  A20_mRNA = 5.56657e-05/nucleus;
  A20_mRNA has a_mole_per_pl;
  IkBa_mRNA = 5.31517e-05/nucleus;
  IkBa_mRNA has a_mole_per_pl;
  XIAP_mRNA = 0.000219646/nucleus;
  XIAP_mRNA has a_mole_per_pl;
  FLIP_mRNA = 0.000139056/nucleus;
  FLIP_mRNA has a_mole_per_pl;
  BAR = 0.28789/cytoplasm;
  BAR has a_mole_per_pl;
  XIAP = 7.83371/cytoplasm;
  XIAP has a_mole_per_pl;
  pCasp8 = 3.2/cytoplasm;
  pCasp8 has a_mole_per_pl;
  pCasp3 = 0.8/cytoplasm;
  pCasp3 has a_mole_per_pl;
  pCasp6 = 0.064/cytoplasm;
  pCasp6 has a_mole_per_pl;
  Casp8 = 0;
  Casp8 has a_mole_per_pl;
  Casp3 = 0;
  Casp3 has a_mole_per_pl;
  Casp6 = 0;
  Casp6 has a_mole_per_pl;
  BAR_Casp8 = 0;
  BAR_Casp8 has a_mole_per_pl;
  XIAP_Casp3 = 0;
  XIAP_Casp3 has a_mole_per_pl;
  PARP = 1.66667/cytoplasm;
  PARP has a_mole_per_pl;
  cPARP = 0;
  cPARP has a_mole_per_pl;

  // Compartment initializations:
  cytoplasm = 3.2;
  cytoplasm has pl;
  extracellular = 1344;
  extracellular has pl;
  nucleus = 1.056;
  nucleus has pl;

  // Variable initializations:
  J1_ka_1 = 0.001;
  J1_ka_1 has per_second;
  J2_ka_2 = 2.8e-07;
  J2_ka_2 has a_mole_per_second;
  J3_ka_3 = 5.6e-05;
  J3_ka_3 has per_second;
  J4_ka_4 = 2.0256e-05;
  J4_ka_4 has a_mole_per_second;
  J4_kd_4 = 0.0001;
  J4_kd_4 has per_second;
  J5_ka_5 = 2.9344e-05;
  J5_ka_5 has a_mole_per_second;
  J5_kd_5 = 0.0001;
  J5_kd_5 has per_second;
  J6_ka_6 = 3.3056e-05;
  J6_ka_6 has a_mole_per_second;
  J6_kd_6 = 0.0001;
  J6_kd_6 has per_second;
  J7_ka_7 = 3.0944e-05;
  J7_ka_7 has a_mole_per_second;
  J7_kd_7 = 0.0001;
  J7_kd_7 has per_second;
  J8_ka_8 = 5.6e-05;
  J8_ka_8 has per_second;
  J9_ka_9 = 0.02352;
  J9_ka_9 has per_second;
  J10_ka_10 = 5.6e-05;
  J10_ka_10 has per_second;
  J11_ka_11 = 5.6e-05;
  J11_ka_11 has per_second;
  J12_ka_12 = 5.6e-05;
  J12_ka_12 has per_second;
  J13_ka_13 = 5.6e-05;
  J13_ka_13 has per_second;
  J14_ka_14 = 5.6e-05;
  J14_ka_14 has per_second;
  J15_ka_15 = 5.6e-05;
  J15_ka_15 has per_second;
  J16_ka_16 = 5.6e-05;
  J16_ka_16 has per_second;
  J17_ka_17 = 5.6e-05;
  J17_ka_17 has per_second;
  J18_ka_18 = 0.00953471;
  J18_ka_18 has per_a_mole_per_second;
  J18_kd_18 = 6.60377e-05;
  J18_kd_18 has per_second;
  J19_ka_19 = 0.00427827;
  J19_ka_19 has per_a_mole_per_second;
  J20_ka_20 = 0.0976562;
  J20_ka_20 has per_a_mole_squared_per_second;
  J21_ka_21 = 0.001135;
  J21_ka_21 has per_second;
  J22_ka_22 = 0.001135;
  J22_ka_22 has per_second;
  J23_ka_23 = 0.0118534;
  J23_ka_23 has per_a_mole_squared_per_second;
  J24_ka_24 = 0.1135;
  J24_ka_24 has per_second;
  J25_ka_25 = 0.3125;
  J25_ka_25 has per_a_mole_per_second;
  J26_ka_26 = 0.3125;
  J26_ka_26 has per_a_mole_per_second;
  J27_ka_27 = 0.03125;
  J27_ka_27 has per_a_mole_per_second;
  J28_ka_28 = 0.03125;
  J28_ka_28 has per_a_mole_per_second;
  J29_ka_29 = 0.45;
  J29_ka_29 has per_second;
  J30_ka_30 = 0.3125;
  J30_ka_30 has per_a_mole_per_second;
  J31_ka_31 = 0.3125;
  J31_ka_31 has per_a_mole_per_second;
  J32_ka_32 = 0.3;
  J32_ka_32 has per_second;
  J33_ka_33 = 0.00976562;
  J33_ka_33 has per_a_mole_squared_per_second;
  J34_ka_34 = 0.03125;
  J34_ka_34 has per_a_mole_per_second;
  J35_ka_35 = 6.4e-05;
  J35_ka_35 has a_mole_per_second;
  J35_kd_35 = 0.0001;
  J35_kd_35 has per_second;
  J36_ka_36 = 1.6e-06;
  J36_ka_36 has a_mole_per_second;
  J36_kd_36 = 0.0001;
  J36_kd_36 has per_second;
  J37_ka_37 = 2.24902e-06;
  J37_ka_37 has a_mole_per_second;
  J37_kd_37 = 0.0001;
  J37_kd_37 has per_second;
  J38_ka_38 = 0.000772256;
  J38_ka_38 has a_mole_per_second;
  J38_kd_38 = 0.0001;
  J38_kd_38 has per_second;
  J39_ka_39 = 9.6e-06;
  J39_ka_39 has a_mole_per_second;
  J39_kd_39 = 0.0001;
  J39_kd_39 has per_second;
  J40_ka_40 = 0.0001;
  J40_ka_40 has per_second;
  J41_ka_41 = 0.0001;
  J41_ka_41 has per_second;
  J42_ka_42 = 0.0001;
  J42_ka_42 has per_second;
  J43_ka_43 = 0.000394201;
  J43_ka_43 has per_second;
  J44_ka_44 = 0.00154022;
  J44_ka_44 has per_second;
  J45_ka_45 = 0.0001;
  J45_ka_45 has per_second;
  J46_ka_46 = 0.0001;
  J46_ka_46 has per_second;
  J47_ka_47 = 0.0115517;
  J47_ka_47 has per_second;
  J48_ka_48 = 0.000470498;
  J48_ka_48 has per_second;
  J49_ka_49 = 0.000104931;
  J49_ka_49 has per_second;
  J50_ka_50 = 0.000165744;
  J50_ka_50 has per_second;
  J51_ka_51 = 93.75;
  J51_ka_51 has per_a_mole_per_second;
  J52_ka_52 = 0.1;
  J52_ka_52 has per_second;
  J53_ka_53 = 0.00625;
  J53_ka_53 has per_a_mole_per_second;
  J54_ka_54 = 1.25;
  J54_ka_54 has per_a_mole_per_second;
  J55_ka_55 = 0.104167;
  J55_ka_55 has per_a_mole_per_second;
  J56_ka_56 = 0.0125;
  J56_ka_56 has per_second;
  J57_ka_57 = 3.0303e-05;
  J57_ka_57 has per_second;
  J58_ka_58 = 0.0606061;
  J58_ka_58 has per_second;
  J59_ka_59 = 0.005;
  J59_ka_59 has per_second;
  J59_kd_59 = 0.00257576;
  J59_kd_59 has per_second;
  J60_ka_60 = 1.4348;
  J60_ka_60 has per_a_mole_per_second;
  J61_ka_61 = 0.0151515;
  J61_ka_61 has per_second;
  J62_ka_62 = 3.78788e-05;
  J62_ka_62 has per_second;
  J63_ka_63 = 0.0151515;
  J63_ka_63 has per_second;
  J64_ka_64 = 3.33333e-05;
  J64_ka_64 has per_second;
  J65_ka_65 = 0.0506061;
  J65_ka_65 has per_second;
  J66_ka_66 = 3.33333e-05;
  J66_ka_66 has per_second;
  J67_ka_67 = 0.00687273;
  J67_ka_67 has per_second;
  J68_ka_68 = 0.000197531;
  J68_ka_68 has a_mole_per_second;
  J68_kd_68 = 6.17284e-05;
  J68_kd_68 has per_second;
  J69_ka_69 = 4.93827e-05;
  J69_ka_69 has a_mole_per_second;
  J69_kd_69 = 6.17284e-05;
  J69_kd_69 has per_second;
  J70_ka_70 = 3.95062e-06;
  J70_ka_70 has a_mole_per_second;
  J70_kd_70 = 6.17284e-05;
  J70_kd_70 has per_second;
  J71_ka_71 = 5.78704e-05;
  J71_ka_71 has per_second;
  J72_ka_72 = 5.78704e-05;
  J72_ka_72 has per_second;
  J73_ka_73 = 5.78704e-05;
  J73_ka_73 has per_second;
  J74_ka_74 = 5.78704e-05;
  J74_ka_74 has per_second;
  J75_ka_75 = 1.66603e-06;
  J75_ka_75 has a_mole_per_second;
  J75_kd_75 = 5.78704e-06;
  J75_kd_75 has per_second;
  J76_ka_76 = 5.78704e-05;
  J76_ka_76 has per_second;
  J77_ka_77 = 5.78704e-06;
  J77_ka_77 has per_second;
  J77_kd_77 = 9.64506e-06;
  J77_kd_77 has a_mole_per_second;
  J78_ka_78 = 5.78704e-06;
  J78_ka_78 has per_second;
  J79_ka_79 = 0.015625;
  J79_ka_79 has per_a_mole_per_second;
  J80_ka_80 = 0.009375;
  J80_ka_80 has per_a_mole_per_second;
  J81_ka_81 = 0.0015625;
  J81_ka_81 has per_a_mole_per_second;
  J82_ka_82 = 0.625;
  J82_ka_82 has per_a_mole_per_second;
  J82_kd_82 = 0.001;
  J82_kd_82 has per_second;
  J83_ka_83 = 1.875;
  J83_ka_83 has per_a_mole_per_second;
  J84_ka_84 = 5e-05;
  J84_ka_84 has per_second;
  J85_ka_85 = 0.15625;
  J85_ka_85 has per_a_mole_per_second;
  J86_ka_86 = 0.15625;
  J86_ka_86 has per_a_mole_per_second;
  J87_ka_87 = 0.1875;
  J87_ka_87 has per_a_mole_per_second;
  J88_ka_88 = 0.520833;
  J88_ka_88 has per_a_mole_per_second;
  J88_kd_88 = 0.001;
  J88_kd_88 has per_second;

  // Other declarations:
  const cytoplasm, extracellular, nucleus;

  // Unit definitions:
  unit a_mole = 1e-18 mole;
  unit per_second = 1 / second;
  unit pl = 1e-12 litre;
  unit a_mole_per_second = 1e-18 mole / second;
  unit per_a_mole_per_second = 1 / (1e-18 mole * second);
  unit per_a_mole_squared_per_second = 1 / ((1e-18 mole)^2 * second);
  unit a_mole_per_pl = 1e-18 mole / 1e-12 litre;

  // Display Names:
  TNF_TNFR_E is "TNF:TNFR_E";
  TNF_TNFR_TRADD is "TNF:TNFR:TRADD";
  TNFRC2_FLIP is "TNFRC2:FLIP";
  TNFRC2_pCasp8 is "TNFRC2:pCasp8";
  TNFRC2_FLIP_FLIP is "TNFRC2:FLIP:FLIP";
  TNFRC2_pCasp8_pCasp8 is "TNFRC2:pCasp8:pCasp8";
  TNFRC2_FLIP_pCasp8 is "TNFRC2:FLIP:pCasp8";
  TNFRC2_FLIP_pCasp8_RIP_TRAF2 is "TNFRC2:FLIP:pCasp8:RIP:TRAF2";
  IkBa_NFkB is "IkBa:NFkB";
  IkBa_NFkB_N is "IkBa:NFkB_N";
  BAR_Casp8 is "BAR:Casp8";
  XIAP_Casp3 is "XIAP:Casp3";
  J1 is "TNFR transport into membrane";
  J2 is "TNFR production";
  J3 is "TNFR degradation";
  J4 is "RIP turnover";
  J5 is "TRADD turnover";
  J6 is "TRAF2 turnover";
  J7 is "FADD turnover";
  J8 is "TNF~TNFR degradation";
  J9 is "TNF:TNFR:TRADD degradation";
  J10 is "TNFR Complex1 degradation";
  J11 is "TNFR Complex2 degradation";
  J12 is "TNFR Complex2~FLIP degradation";
  J13 is "TNFR Complex2~FLIP~FLIP degradation";
  J14 is "TNFR Complex2~Procaspase-8 degradation";
  J15 is "TNFR Complex2~Procaspase-8~Procaspase-8 degradation";
  J16 is "TNFR Complex2~FLIP~Procaspase-8 degradation";
  J17 is "TNFR Complex2~FLIP~Procaspase-8~RIP~TRAF2 degradation";
  J18 is "TNF~TNFR binding and release";
  J19 is "TNF~TNFR~TRADD building";
  J20 is "TNFR Complex1 building";
  J21 is "Receptor internalisation step1";
  J22 is "Receptor internalisation step2";
  J23 is "Receptor internalisation step3";
  J24 is "Receptor internalisation step4";
  J25 is "FLIP recruitment to TNFR Complex2";
  J26 is "FLIP recruitment to TNFR Complex2~FLIP";
  J27 is "Procaspase-8 recruitment to TNFR Complex2";
  J28 is "Procaspase-8 recruitment to TNFR Complex2~Procaspase-8";
  J29 is "Caspase-8 activation by TNFR Complex2";
  J30 is "FLIP recruitment to TNFR Complex2~Procaspase-8";
  J31 is "Procaspase-8 recruitment to TNFR Complex2~FLIP";
  J32 is "Caspase-8 activation by TNFR Complex2~FLIP~Procaspase-8";
  J33 is "RIP~TRAF2 recruitment at TNFR Complex2~FLIP~Procaspase-8";
  J34 is "IKK activation by TNFR Complex2~FLIP~Procaspase-8~RIP~TRAF2";
  J35 is "IKK turnover";
  J36 is "NF-kappaB turnover";
  J37 is "FLIP turnover";
  J38 is "XIAP turnover";
  J39 is "A20 turnover";
  J40 is "IKK* degradation";
  J41 is "IkappaBalpha~NF-kappaB complex degradation";
  J42 is "nuclear NF-kappaB degradation";
  J43 is "IkappaBalpha-mRNA degradation";
  J44 is "IkappaBalpha degradation";
  J45 is "free nuclear IkappaBalpha degradation";
  J46 is "nuclear IkappaBalpha~NF-kappaB complex degradation";
  J47 is "P-IkappaBa degradation";
  J48 is "A20-mRNA degradation";
  J49 is "XIAP-mRNA degradation";
  J50 is "FLIP-mRNA degradation";
  J51 is "IKK activation by TNFR Complex1";
  J52 is "IKK* inactivation";
  J53 is "TNFR Complex1 inactivation by A20";
  J54 is "IkappaBalpha NF-kappaB association";
  J55 is "release and degradation of bound IkappaBalpha";
  J56 is "NF-kappaB nuclear translocation";
  J57 is "IkappaBalpha-mRNA transcription";
  J58 is "IkappaBalpha translation";
  J59 is "IkappaBalpha nuclear translocation";
  J60 is "IkappaBalpha binding NF-kappaB in nucleus";
  J61 is "IkappaBalpha_NF-kappaB N-C export";
  J62 is "A20-mRNA transcription";
  J63 is "A20 translation";
  J64 is "XIAP-mRNA transcription";
  J65 is "XIAP translation";
  J66 is "FLIP-mRNA transcription";
  J67 is "FLIP translation";
  J68 is "Procaspase-8 turnover";
  J69 is "Procaspase-3 turnover";
  J70 is "Procaspase-6 turnover";
  J71 is "Caspase-8 degradation";
  J72 is "Caspase-3 degradation";
  J73 is "Caspase-6 degradation";
  J74 is "XIAP~Caspase-3 complex degradation";
  J75 is "BAR turnover";
  J76 is "BAR~Caspase-8 complex degradation";
  J77 is "PARP turnover";
  J78 is "CPARP degradation";
  J79 is "Caspase-3 activation";
  J80 is "Caspase-6 activation";
  J81 is "Caspase-8 activation";
  J82 is "XIAP~Caspase-3 complex formation";
  J83 is "XIAP degradation due to Caspase-3";
  J84 is "XIAP~Caspase-3 complex breakup";
  J85 is "negative feedback loop Caspase-3 on TNFR Complex1";
  J86 is "FLIP degradation by Caspase-3";
  J87 is "PARP cleavage as Casp3 substrate";
  J88 is "BAR~Caspase-8 complex formation";

  // SBO terms:
  cytoplasm.sboTerm = 290
  extracellular.sboTerm = 290
  nucleus.sboTerm = 290
  TNFR_E.sboTerm = 252
  TNF_E.sboTerm = 252
  TNF_TNFR_E.sboTerm = 297
  TNFR.sboTerm = 252
  RIP.sboTerm = 252
  TRADD.sboTerm = 252
  TRAF2.sboTerm = 252
  FADD.sboTerm = 252
  TNF_TNFR_TRADD.sboTerm = 297
  TNFRC1.sboTerm = 297
  TNFRCint1.sboTerm = 297
  TNFRCint2.sboTerm = 297
  TNFRCint3.sboTerm = 297
  TNFRC2.sboTerm = 297
  FLIP.sboTerm = 252
  TNFRC2_FLIP.sboTerm = 297
  TNFRC2_pCasp8.sboTerm = 297
  TNFRC2_FLIP_FLIP.sboTerm = 297
  TNFRC2_pCasp8_pCasp8.sboTerm = 297
  TNFRC2_FLIP_pCasp8.sboTerm = 297
  TNFRC2_FLIP_pCasp8_RIP_TRAF2.sboTerm = 297
  IKK.sboTerm = 252
  IKKa.sboTerm = 252
  A20.sboTerm = 252
  NFkB.sboTerm = 252
  IkBa.sboTerm = 252
  IkBa_NFkB.sboTerm = 297
  PIkBa.sboTerm = 252
  NFkB_N.sboTerm = 252
  IkBa_N.sboTerm = 252
  IkBa_NFkB_N.sboTerm = 297
  A20_mRNA.sboTerm = 278
  IkBa_mRNA.sboTerm = 278
  XIAP_mRNA.sboTerm = 278
  FLIP_mRNA.sboTerm = 278
  BAR.sboTerm = 252
  XIAP.sboTerm = 252
  pCasp8.sboTerm = 252
  pCasp3.sboTerm = 252
  pCasp6.sboTerm = 252
  Casp8.sboTerm = 252
  Casp3.sboTerm = 252
  Casp6.sboTerm = 252
  BAR_Casp8.sboTerm = 297
  XIAP_Casp3.sboTerm = 297
  PARP.sboTerm = 252
  cPARP.sboTerm = 252
  J1.sboTerm = 185
  J1_ka_1.sboTerm = 9
  J2.sboTerm = 393
  J2_ka_2.sboTerm = 9
  J3.sboTerm = 179
  J3_ka_3.sboTerm = 356
  J4.sboTerm = 357
  J4_ka_4.sboTerm = 9
  J4_kd_4.sboTerm = 9
  J5.sboTerm = 357
  J5_ka_5.sboTerm = 9
  J5_kd_5.sboTerm = 9
  J6.sboTerm = 357
  J6_ka_6.sboTerm = 9
  J6_kd_6.sboTerm = 9
  J7.sboTerm = 357
  J7_ka_7.sboTerm = 9
  J7_kd_7.sboTerm = 9
  J8.sboTerm = 179
  J8_ka_8.sboTerm = 356
  J9.sboTerm = 179
  J9_ka_9.sboTerm = 356
  J10.sboTerm = 179
  J10_ka_10.sboTerm = 356
  J11.sboTerm = 179
  J11_ka_11.sboTerm = 356
  J12.sboTerm = 179
  J12_ka_12.sboTerm = 356
  J13.sboTerm = 179
  J13_ka_13.sboTerm = 356
  J14.sboTerm = 179
  J14_ka_14.sboTerm = 356
  J15.sboTerm = 179
  J15_ka_15.sboTerm = 356
  J16.sboTerm = 179
  J16_ka_16.sboTerm = 356
  J17.sboTerm = 179
  J17_ka_17.sboTerm = 356
  J18.sboTerm = 526
  J18_ka_18.sboTerm = 337
  J18_kd_18.sboTerm = 337
  J19.sboTerm = 526
  J19_ka_19.sboTerm = 337
  J20.sboTerm = 526
  J20_ka_20.sboTerm = 337
  J21.sboTerm = 395
  J21_ka_21.sboTerm = 9
  J22.sboTerm = 395
  J22_ka_22.sboTerm = 9
  J23.sboTerm = 395
  J23_ka_23.sboTerm = 9
  J24.sboTerm = 395
  J24_ka_24.sboTerm = 9
  J25.sboTerm = 526
  J25_ka_25.sboTerm = 9
  J26.sboTerm = 526
  J26_ka_26.sboTerm = 9
  J27.sboTerm = 526
  J27_ka_27.sboTerm = 9
  J28.sboTerm = 526
  J28_ka_28.sboTerm = 9
  J29.sboTerm = 180
  J29_ka_29.sboTerm = 363
  J30.sboTerm = 526
  J30_ka_30.sboTerm = 9
  J31.sboTerm = 526
  J31_ka_31.sboTerm = 9
  J32.sboTerm = 180
  J32_ka_32.sboTerm = 363
  J33.sboTerm = 526
  J33_ka_33.sboTerm = 9
  J34.sboTerm = 170
  J34_ka_34.sboTerm = 363
  J35.sboTerm = 357
  J35_ka_35.sboTerm = 9
  J35_kd_35.sboTerm = 9
  J36.sboTerm = 357
  J36_ka_36.sboTerm = 9
  J36_kd_36.sboTerm = 9
  J37.sboTerm = 357
  J37_ka_37.sboTerm = 9
  J37_kd_37.sboTerm = 9
  J38.sboTerm = 357
  J38_ka_38.sboTerm = 9
  J38_kd_38.sboTerm = 9
  J39.sboTerm = 357
  J39_ka_39.sboTerm = 9
  J39_kd_39.sboTerm = 9
  J40.sboTerm = 179
  J40_ka_40.sboTerm = 356
  J41.sboTerm = 179
  J41_ka_41.sboTerm = 356
  J42.sboTerm = 179
  J42_ka_42.sboTerm = 356
  J43.sboTerm = 179
  J43_ka_43.sboTerm = 356
  J44.sboTerm = 179
  J44_ka_44.sboTerm = 356
  J45.sboTerm = 179
  J45_ka_45.sboTerm = 356
  J46.sboTerm = 179
  J46_ka_46.sboTerm = 356
  J47.sboTerm = 179
  J47_ka_47.sboTerm = 356
  J48.sboTerm = 179
  J48_ka_48.sboTerm = 356
  J49.sboTerm = 179
  J49_ka_49.sboTerm = 356
  J50.sboTerm = 179
  J50_ka_50.sboTerm = 356
  J51.sboTerm = 170
  J51_ka_51.sboTerm = 363
  J52.sboTerm = 169
  J52_ka_52.sboTerm = 349
  J53.sboTerm = 169
  J53_ka_53.sboTerm = 349
  J54.sboTerm = 526
  J54_ka_54.sboTerm = 337
  J55.sboTerm = 179
  J55_ka_55.sboTerm = 356
  J56.sboTerm = 185
  J56_ka_56.sboTerm = 9
  J57.sboTerm = 183
  J57_ka_57.sboTerm = 9
  J58.sboTerm = 184
  J58_ka_58.sboTerm = 9
  J59.sboTerm = 526
  J59_ka_59.sboTerm = 9
  J59_kd_59.sboTerm = 9
  J60.sboTerm = 526
  J60_ka_60.sboTerm = 337
  J61.sboTerm = 185
  J61_ka_61.sboTerm = 9
  J62.sboTerm = 183
  J62_ka_62.sboTerm = 9
  J63.sboTerm = 184
  J63_ka_63.sboTerm = 9
  J64.sboTerm = 183
  J64_ka_64.sboTerm = 9
  J65.sboTerm = 184
  J65_ka_65.sboTerm = 9
  J66.sboTerm = 183
  J66_ka_66.sboTerm = 9
  J67.sboTerm = 184
  J67_ka_67.sboTerm = 9
  J68.sboTerm = 357
  J68_ka_68.sboTerm = 9
  J68_kd_68.sboTerm = 9
  J69.sboTerm = 357
  J69_ka_69.sboTerm = 9
  J69_kd_69.sboTerm = 9
  J70.sboTerm = 357
  J70_ka_70.sboTerm = 9
  J70_kd_70.sboTerm = 9
  J71.sboTerm = 179
  J71_ka_71.sboTerm = 356
  J72.sboTerm = 179
  J72_ka_72.sboTerm = 356
  J73.sboTerm = 179
  J73_ka_73.sboTerm = 356
  J74.sboTerm = 179
  J74_ka_74.sboTerm = 356
  J75.sboTerm = 357
  J75_ka_75.sboTerm = 9
  J75_kd_75.sboTerm = 9
  J76.sboTerm = 179
  J76_ka_76.sboTerm = 356
  J77.sboTerm = 357
  J77_ka_77.sboTerm = 9
  J77_kd_77.sboTerm = 9
  J78.sboTerm = 179
  J78_ka_78.sboTerm = 356
  J79.sboTerm = 170
  J79_ka_79.sboTerm = 363
  J80.sboTerm = 170
  J80_ka_80.sboTerm = 363
  J81.sboTerm = 170
  J81_ka_81.sboTerm = 363
  J82.sboTerm = 526
  J82_ka_82.sboTerm = 337
  J82_kd_82.sboTerm = 337
  J83.sboTerm = 179
  J83_ka_83.sboTerm = 356
  J84.sboTerm = 180
  J84_ka_84.sboTerm = 282
  J85.sboTerm = 169
  J85_ka_85.sboTerm = 261
  J86.sboTerm = 179
  J86_ka_86.sboTerm = 356
  J87.sboTerm = 178
  J87_ka_87.sboTerm = 356
  J88.sboTerm = 526
  J88_ka_88.sboTerm = 337
  J88_kd_88.sboTerm = 337

  // CV terms:
  cytoplasm hypernym "http://identifiers.org/obo.go/GO:0005737"
  extracellular hypernym "http://identifiers.org/obo.go/GO:0005576"
  nucleus hypernym "http://identifiers.org/obo.go/GO:0005634"
  TNFR_E hypernym "http://identifiers.org/uniprot/P19438"
  TNF_E hypernym "http://identifiers.org/uniprot/P01375"
  TNF_TNFR_E hypernym "http://identifiers.org/uniprot/P19438",
                      "http://identifiers.org/uniprot/P01375"
  TNFR hypernym "http://identifiers.org/uniprot/P19438"
  RIP hypernym "http://identifiers.org/uniprot/Q13546"
  TRADD hypernym "http://identifiers.org/uniprot/Q15628"
  TRAF2 hypernym "http://identifiers.org/uniprot/Q12933"
  FADD hypernym "http://identifiers.org/uniprot/Q13158"
  TNF_TNFR_TRADD hypernym "http://identifiers.org/uniprot/P19438",
                          "http://identifiers.org/uniprot/P01375",
                          "http://identifiers.org/uniprot/Q15628"
  TNFRC1 hypernym "http://identifiers.org/uniprot/P19438",
                  "http://identifiers.org/uniprot/P01375",
                  "http://identifiers.org/uniprot/Q15628",
                  "http://identifiers.org/uniprot/Q12933",
                  "http://identifiers.org/uniprot/Q13546"
  TNFRCint1 hypernym "http://identifiers.org/uniprot/P19438",
                     "http://identifiers.org/uniprot/P01375",
                     "http://identifiers.org/uniprot/Q15628",
                     "http://identifiers.org/uniprot/Q12933",
                     "http://identifiers.org/uniprot/Q13546"
  TNFRCint2 hypernym "http://identifiers.org/uniprot/P19438",
                     "http://identifiers.org/uniprot/P01375",
                     "http://identifiers.org/uniprot/Q15628"
  TNFRCint3 hypernym "http://identifiers.org/uniprot/P19438",
                     "http://identifiers.org/uniprot/P01375",
                     "http://identifiers.org/uniprot/Q15628",
                     "http://identifiers.org/uniprot/Q13158"
  TNFRC2 hypernym "http://identifiers.org/uniprot/P19438",
                  "http://identifiers.org/uniprot/P01375",
                  "http://identifiers.org/uniprot/Q15628",
                  "http://identifiers.org/uniprot/Q13158"
  FLIP hypernym "http://identifiers.org/uniprot/O15519"
  TNFRC2_FLIP hypernym "http://identifiers.org/uniprot/P19438",
                       "http://identifiers.org/uniprot/P01375",
                       "http://identifiers.org/uniprot/Q15628",
                       "http://identifiers.org/uniprot/Q13158",
                       "http://identifiers.org/uniprot/O15519"
  TNFRC2_pCasp8 hypernym "http://identifiers.org/uniprot/P19438",
                         "http://identifiers.org/uniprot/P01375",
                         "http://identifiers.org/uniprot/Q15628",
                         "http://identifiers.org/uniprot/Q13158",
                         "http://identifiers.org/uniprot/Q14790"
  TNFRC2_FLIP_FLIP hypernym "http://identifiers.org/uniprot/P19438",
                            "http://identifiers.org/uniprot/P01375",
                            "http://identifiers.org/uniprot/Q15628",
                            "http://identifiers.org/uniprot/Q13158",
                            "http://identifiers.org/uniprot/O15519"
  TNFRC2_pCasp8_pCasp8 hypernym "http://identifiers.org/uniprot/P19438",
                                "http://identifiers.org/uniprot/P01375",
                                "http://identifiers.org/uniprot/Q15628",
                                "http://identifiers.org/uniprot/Q13158",
                                "http://identifiers.org/uniprot/Q14790"
  TNFRC2_FLIP_pCasp8 hypernym "http://identifiers.org/uniprot/P19438",
                              "http://identifiers.org/uniprot/P01375",
                              "http://identifiers.org/uniprot/Q15628",
                              "http://identifiers.org/uniprot/Q13158",
                              "http://identifiers.org/uniprot/O15519",
                              "http://identifiers.org/uniprot/Q14790"
  TNFRC2_FLIP_pCasp8_RIP_TRAF2 hypernym "http://identifiers.org/uniprot/P19438",
                                        "http://identifiers.org/uniprot/P01375",
                                        "http://identifiers.org/uniprot/Q15628",
                                        "http://identifiers.org/uniprot/Q13158",
                                        "http://identifiers.org/uniprot/O15519",
                                        "http://identifiers.org/uniprot/Q14790",
                                        "http://identifiers.org/uniprot/Q13546",
                                        "http://identifiers.org/uniprot/Q12933"
  IKK hypernym "http://identifiers.org/uniprot/O15111"
  IKKa hypernym "http://identifiers.org/uniprot/O15111"
  A20 hypernym "http://identifiers.org/uniprot/P21580"
  NFkB hypernym "http://identifiers.org/uniprot/P19838"
  IkBa hypernym "http://identifiers.org/uniprot/P25963"
  IkBa_NFkB hypernym "http://identifiers.org/uniprot/P25963",
                     "http://identifiers.org/uniprot/P19838"
  PIkBa hypernym "http://identifiers.org/uniprot/P25963"
  NFkB_N hypernym "http://identifiers.org/uniprot/P19838"
  IkBa_N hypernym "http://identifiers.org/uniprot/P25963"
  IkBa_NFkB_N hypernym "http://identifiers.org/uniprot/P25963",
                       "http://identifiers.org/uniprot/P19838"
  A20_mRNA hypernym "http://identifiers.org/ensembl/ENST00000237289"
  IkBa_mRNA hypernym "http://identifiers.org/ensembl/ENST00000216797"
  XIAP_mRNA hypernym "http://identifiers.org/ensembl/ENST00000371199"
  FLIP_mRNA hypernym "http://identifiers.org/ensembl/ENST00000309955"
  BAR hypernym "http://identifiers.org/uniprot/Q9NZS9"
  XIAP hypernym "http://identifiers.org/uniprot/P98170"
  pCasp8 hypernym "http://identifiers.org/uniprot/Q14790"
  pCasp3 hypernym "http://identifiers.org/uniprot/P42574"
  pCasp6 hypernym "http://identifiers.org/uniprot/P55212"
  Casp8 hypernym "http://identifiers.org/uniprot/Q14790"
  Casp3 hypernym "http://identifiers.org/uniprot/P42574"
  Casp6 hypernym "http://identifiers.org/uniprot/P55212"
  BAR_Casp8 hypernym "http://identifiers.org/uniprot/Q9NZS9",
                     "http://identifiers.org/uniprot/Q14790"
  XIAP_Casp3 hypernym "http://identifiers.org/uniprot/P98170",
                      "http://identifiers.org/uniprot/P42574"
  PARP hypernym "http://identifiers.org/uniprot/P09874"
  cPARP hypernym "http://identifiers.org/uniprot/P09874"
end

Schliemann2011_TNF_ProAntiApoptosis is "Schliemann2011_TNF_ProAntiApoptosis"

Schliemann2011_TNF_ProAntiApoptosis model_entity_is "http://identifiers.org/biomodels.db/MODEL1112210000"
Schliemann2011_TNF_ProAntiApoptosis model_entity_is "http://identifiers.org/biomodels.db/BIOMD0000000407"
Schliemann2011_TNF_ProAntiApoptosis description "http://identifiers.org/pubmed/22204418"
Schliemann2011_TNF_ProAntiApoptosis taxon "http://identifiers.org/taxonomy/9606",
                                          "http://identifiers.org/obo.bto/BTO:0002267"
Schliemann2011_TNF_ProAntiApoptosis parthood "http://identifiers.org/kegg.pathway/map04210"
Schliemann2011_TNF_ProAntiApoptosis hypernym "http://identifiers.org/obo.go/GO:0006915"
