// Created by libAntimony v2.13.0
model *testid()

  // Compartments and Species:
  compartment cytosol;
  species FeIII in cytosol, FeII in cytosol, FeII_O2 in cytosol, FeIII_star in cytosol;
  species FeII_star in cytosol, FeII_star_O2 in cytosol, FeIII_NO in cytosol;
  species FeII_NO in cytosol, $NADPH in cytosol, $O2 in cytosol, $citrulline in cytosol;
  species $NO3 in cytosol, $NO in cytosol, $NADPplus in cytosol, $FeIII_t in cytosol;

  // Assignment Rules:
  FeIII_t := FeIII + FeIII_star;

  // Reactions:
  r1: FeIII + $NADPH => FeII + $NADPplus; cytosol*k1*FeIII;
  r2: FeII + $O2 => FeII_O2; cytosol*k2*FeII*O2;
  r3: FeII_O2 => FeIII_star; cytosol*k3*FeII_O2;
  r4: FeIII_star + 0.5 $NADPH => FeII_star + 0.5 $NADPplus; cytosol*k4*FeIII_star;
  r5: FeII_star + $O2 => FeII_star_O2; cytosol*k5*FeII_star*O2;
  r6: FeII_star_O2 => FeIII_NO + $citrulline; cytosol*k6*FeII_star_O2;
  rF: FeIII_NO => FeIII + $NO; cytosol*k7*FeIII_NO;
  rG: FeIII_NO + 0.5 $NADPH => FeII_NO + 0.5 $NADPplus; cytosol*k8*FeIII_NO;
  r9: FeII_NO => FeII + $NO; cytosol*k9*FeII_NO;
  r10: FeII_NO + $O2 => FeIII + $NO3; cytosol*k10*FeII_NO*O2;

  // Species initializations:
  FeIII = 1;
  FeII = 0;
  FeII_O2 = 0;
  FeIII_star = 0;
  FeII_star = 0;
  FeII_star_O2 = 0;
  FeIII_NO = 0;
  FeII_NO = 0;
  NADPH = 40;
  O2 = 140;
  citrulline = 0;
  NO3 = 0;
  NO = 0;
  NADPplus = 0;

  // Compartment initializations:
  cytosol = 1;

  // Variable initializations:
  k1 = 2.6;
  k1 has persec;
  k2 = 0.9;
  k2 has peruMpersec;
  k3 = 26;
  k3 has persec;
  k4 = 2.6;
  k4 has persec;
  k5 = 0.9;
  k5 has peruMpersec;
  k6 = 26;
  k6 has persec;
  k7 = 5;
  k7 has persec;
  k8 = 2.6;
  k8 has persec;
  k9 = 0.0001;
  k9 has persec;
  k10 = 0.0013;
  k10 has peruMpersec;

  // Other declarations:
  const cytosol, k1, k2, k3, k4, k5, k6, k7, k8, k9, k10;

  // Unit definitions:
  unit substance = 1e-6 mole;
  unit peruMpersec = litre / (1e-6 mole * second);
  unit uM = 1e-6 mole / litre;
  unit persec = 1 / second;

  // Display Names:
  substance is "micromole";
  citrulline is "citruline";

  // SBO terms:
  FeIII.sboTerm = 297
  FeII.sboTerm = 297
  FeII_O2.sboTerm = 297
  FeIII_star.sboTerm = 297
  FeII_star.sboTerm = 297
  FeII_star_O2.sboTerm = 297
  FeIII_NO.sboTerm = 297
  FeII_NO.sboTerm = 297
  NADPH.sboTerm = 247
  O2.sboTerm = 247
  citrulline.sboTerm = 247
  NO3.sboTerm = 247
  NO.sboTerm = 247
  NADPplus.sboTerm = 327
  FeIII_t.sboTerm = 297
  k1.sboTerm = 35
  k2.sboTerm = 339
  k3.sboTerm = 35
  k4.sboTerm = 35
  k5.sboTerm = 339
  k6.sboTerm = 35
  k7.sboTerm = 35
  k8.sboTerm = 35
  k9.sboTerm = 35
  k10.sboTerm = 339
  r1.sboTerm = 200
  r2.sboTerm = 177
  r3.sboTerm = 201
  r4.sboTerm = 200
  r5.sboTerm = 177
  r6.sboTerm = 182
  rF.sboTerm = 180
  rG.sboTerm = 200
  r9.sboTerm = 180
  r10.sboTerm = 200

  // CV terms:
  cytosol identity "http://identifiers.org/go/GO:0005829"
  FeIII part "http://identifiers.org/chebi/CHEBI:29034",
             "http://identifiers.org/chebi/CHEBI:17627",
             "http://identifiers.org/uniprot/P29476"
  FeII part "http://identifiers.org/chebi/CHEBI:17627",
            "http://identifiers.org/chebi/CHEBI:29033",
            "http://identifiers.org/uniprot/P29476"
  FeII_O2 identity "http://identifiers.org/chebi/CHEBI:15379",
                   "http://identifiers.org/chebi/CHEBI:29033",
                   "http://identifiers.org/chebi/CHEBI:17627",
                   "http://identifiers.org/uniprot/P29476"
  FeIII_star part "http://identifiers.org/chebi/CHEBI:17627",
                  "http://identifiers.org/chebi/CHEBI:29034",
                  "http://identifiers.org/uniprot/P29476"
  FeII_star part "http://identifiers.org/chebi/CHEBI:17627",
                 "http://identifiers.org/chebi/CHEBI:29033",
                 "http://identifiers.org/uniprot/P29476"
  FeII_star_O2 part "http://identifiers.org/chebi/CHEBI:15379",
                    "http://identifiers.org/chebi/CHEBI:17627",
                    "http://identifiers.org/chebi/CHEBI:29033",
                    "http://identifiers.org/uniprot/P29476"
  FeIII_NO part "http://identifiers.org/chebi/CHEBI:16480",
                "http://identifiers.org/chebi/CHEBI:17627",
                "http://identifiers.org/chebi/CHEBI:29034",
                "http://identifiers.org/uniprot/P29476"
  FeII_NO part "http://identifiers.org/chebi/CHEBI:16480",
               "http://identifiers.org/chebi/CHEBI:17627",
               "http://identifiers.org/chebi/CHEBI:29033",
               "http://identifiers.org/uniprot/P29476"
  NADPH identity "http://identifiers.org/chebi/CHEBI:16474",
                 "http://identifiers.org/kegg.compound/C00005"
  O2 identity "http://identifiers.org/chebi/CHEBI:15379",
              "http://identifiers.org/kegg.compound/C00007"
  citrulline identity "http://identifiers.org/chebi/CHEBI:16349",
                      "http://identifiers.org/kegg.compound/C00327"
  NO3 identity "http://identifiers.org/chebi/CHEBI:17632",
               "http://identifiers.org/kegg.compound/C00244"
  NO identity "http://identifiers.org/chebi/CHEBI:16480",
              "http://identifiers.org/kegg.compound/C00533"
  NADPplus identity "http://identifiers.org/chebi/CHEBI:18009",
                    "http://identifiers.org/kegg.compound/C00006"
  FeIII_t part "http://identifiers.org/chebi/CHEBI:29034",
               "http://identifiers.org/chebi/CHEBI:17627",
               "http://identifiers.org/uniprot/P29476"
  r1 hypernym "http://identifiers.org/go/GO:0016651"
  r4 hypernym "http://identifiers.org/go/GO:0016651"
  rG hypernym "http://identifiers.org/go/GO:0016651"
end

testid is "Santolini2001_nNOS_Mechanism_Regulation"

testid model_entity_is "http://identifiers.org/biomodels.db/MODEL4734733125"
testid model_entity_is "http://identifiers.org/biomodels.db/BIOMD0000000199"
testid description "http://identifiers.org/pubmed/11038356"
testid version "http://identifiers.org/omim/163731"
testid hypernym "http://identifiers.org/go/GO:0004517"
testid taxon "http://identifiers.org/taxonomy/10116"
