
.. DO NOT EDIT.
.. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY.
.. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE:
.. "auto_examples/UV/Cary_simple.py"
.. LINE NUMBERS ARE GIVEN BELOW.

.. only:: html

    .. note::
        :class: sphx-glr-download-link-note

        :ref:`Go to the end <sphx_glr_download_auto_examples_UV_Cary_simple.py>`
        to download the full example code

.. rst-class:: sphx-glr-example-title

.. _sphx_glr_auto_examples_UV_Cary_simple.py:


Simple Cary UV-Vis loading
==========================

A simple demo of loading Cary UV-Vis data.
This example just loads a file and
plots all the spectra in a file, without embellishment

Here we have a file called Pure_T177R1a_pR_210615.BSW on our computer.
There are three requirements for where this file must be stored:

-   It **must** be stored in a folder called "proteorhodopsin" that's itself
    inside a folder called "UV_Vis" (as indicated by the ``exp_type``
    argument).  Typically, this will be achieved by just cloning/syncing the
    entire "UV_Vis" directory of data shared by your lab on google drive,
    etc, etc.
-   Our pyspecdata config file (``~/.pyspecdata`` on Linux/Mac or
    ``~/_pyspecdata`` on Windows) must know about this "UV_Vis" directory.
    If not, you can use the ``pyspecdata_register_dir`` command on the
    command line (see :func:`~pyspecdata.datadir.register_directory`).
-   The name of the file itself must contain the string "T177R1a_pR_210615" →
    note that you don't need to specify the whole file name, just enough for it
    to be unique.

.. GENERATED FROM PYTHON SOURCE LINES 26-39



.. image-sg:: /auto_examples/UV/images/sphx_glr_Cary_simple_001.png
   :alt: UV data
   :srcset: /auto_examples/UV/images/sphx_glr_Cary_simple_001.png, /auto_examples/UV/images/sphx_glr_Cary_simple_001_2_00x.png 2.00x
   :class: sphx-glr-single-img


.. rst-class:: sphx-glr-script-out

 .. code-block:: none

    the experiments present in this file are: dict_keys(['1:40 T177R1a pR Dilution', '1:20 T177R1a pR Dilution'])
    1: UV data |||pm







|

.. code-block:: Python


    import pyspecdata as psd

    data = psd.find_file(
        "T177R1a_pR_210615",
        exp_type="UV_Vis/proteorhodopsin",
        zenodo="21041480",
    )
    print("the experiments present in this file are:", data.keys())
    with psd.figlist_var() as fl:
        fl.next("UV data")
        for j in data.keys():
            fl.plot(data[j], label=j, alpha=0.5)


.. rst-class:: sphx-glr-timing

   **Total running time of the script:** (0 minutes 0.464 seconds)


.. _sphx_glr_download_auto_examples_UV_Cary_simple.py:

.. only:: html

  .. container:: sphx-glr-footer sphx-glr-footer-example

    .. container:: sphx-glr-download sphx-glr-download-jupyter

      :download:`Download Jupyter notebook: Cary_simple.ipynb <Cary_simple.ipynb>`

    .. container:: sphx-glr-download sphx-glr-download-python

      :download:`Download Python source code: Cary_simple.py <Cary_simple.py>`


.. only:: html

 .. rst-class:: sphx-glr-signature

    `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_
