bohra/CustomLog.py,sha256=JRdS-1BWQmZqIm2fejVhCAyAh7T0Gt0Dg5RQjuLSVp4,769
bohra/SnpDetection.py,sha256=6NQ9jDAUZIZweieWmDz2lMOlsiWufWa6LeGOimfKtYQ,35519
bohra/Utils.py,sha256=rB7eCK8LFwu5uaVMYeueWnxqFWE5TMwtRX_USx2NNe0,8434
bohra/__init__.py,sha256=8mdbRxfO1zpQ6zMuCgu4pQrnYQE1iTy9Xauf5NbfY0A,216
bohra/bohra.py,sha256=-L8jAolv3tOvOSHaof07vJQd5ssJ3mtu03MM5YqYHYg,9183
bohra/bohra_install.sh,sha256=V_cTMpnd9g_V4Bg2N5LF2H3hU3wS83wHMouVhz250Fw,13336
bohra/main.nf,sha256=4wGSkCLa6G3paQ2QboKWS0yqp0sUzRtT-xlG_a54nZM,6511
bohra/nextflow.config,sha256=vNc7N-MIftIRBqzPGHJbhIm4x3V2KH0cLotvQbZ7l7M,1955
bohra/version.py,sha256=czfSMbDNXzFMV85pe_vlVCmszlOaauDp0pA0FHh9KOc,17
bohra/modules/collation/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/collation/main.nf,sha256=IHqyafkV7JT5ItWi5mwAFh70TDMOlym9TRzgbrU_iAI,6835
bohra/modules/collation/bin/add_header_mlst.py,sha256=BeR5W6e0p-n8gnp-ZdyCXgety9-lXDIKXgY0lmXRzFU,710
bohra/modules/collation/bin/collate_asm.py,sha256=Tw5yCoDt0_4DhqQGI_QbnZ-BVIW7np6GJ3z9Sg4vPAI,1492
bohra/modules/collation/bin/collate_kraken2.py,sha256=Cp4nuqFDYZ0g86iEzVDH_DUubMok4viO_Rwn5PvLbK0,664
bohra/modules/collation/bin/collate_stats.py,sha256=9WhegX3bLMZ7FFmDUQkXpM-e0XNEsxbifWxgzSgHXDk,1978
bohra/modules/collation/bin/collate_tables.py,sha256=TSK98H7Miis-VWrmd9g9xZHt1pAG3zEwVfCbtVxRccg,362
bohra/modules/collation/bin/compile.py,sha256=7rA3L1JvN6nD7FfFaacOAVlHcV0Ufy6i-wUcCNuana8,12892
bohra/modules/collation/bin/snippy_qc.py,sha256=egO1jrNv4a-v5-U2j0vGo5cIixoiqM0zPlANys9vm8A,1405
bohra/modules/collation/bin/wrangle_mobsuite.py,sha256=Yn9O5ihvh3FaBIeP2H_DRCp1qs9hnoNnMF6337wGX7c,598
bohra/modules/csvtk/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/csvtk/main.nf,sha256=P6F0uFI7LRkhXo6mRdrcZapSlSqCh64sFuzHnmHMGLE,1146
bohra/modules/csvtk/meta.yml,sha256=kzEiK_pHYxhzcwW-ZTY_aWU4pBb2zzFa8_Q4OS2ni2s,1594
bohra/modules/ectyper/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/ectyper/main.nf,sha256=Q3hvPWVBoh423p9y3y-9_e9Ay2nuVsEYkuGcL9Ci-4k,1285
bohra/modules/ectyper/meta.yml,sha256=PwHh4bFrN7ZpUvtWyHny8ar0bonl7GJgcJsYLP3Xiqk,1644
bohra/modules/emmtyper/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/emmtyper/main.nf,sha256=_zU--zEW1EO0DmTsPrpSBIRbwEiIbaa4WHEIbD4g3m4,1304
bohra/modules/emmtyper/meta.yml,sha256=PwHh4bFrN7ZpUvtWyHny8ar0bonl7GJgcJsYLP3Xiqk,1644
bohra/modules/gubbins/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/gubbins/main.nf,sha256=opWLzrQ1Qc-UFA6cd-sIWMGUFJKSdxdtzHWZNZ_8t_Y,1033
bohra/modules/gubbins/meta.yml,sha256=tyAAO1UaGZoUSissaBjm_L0uw9Umt95oOVknuhWIe6w,1870
bohra/modules/iqtree/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/iqtree/main.nf,sha256=Mg-iXvMSkDXKA61OSEg2qBpxcOQBIdiqB9aDd6KPqhY,1201
bohra/modules/iqtree/meta.yml,sha256=kzEiK_pHYxhzcwW-ZTY_aWU4pBb2zzFa8_Q4OS2ni2s,1594
bohra/modules/kleborate/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/kleborate/main.nf,sha256=2mBtGdFtpZeGJCUaqgHsPjtuRL5SCdtEtkDcMQojQq8,1339
bohra/modules/kleborate/meta.yml,sha256=PwHh4bFrN7ZpUvtWyHny8ar0bonl7GJgcJsYLP3Xiqk,1644
bohra/modules/kmc/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/kmc/main.nf,sha256=alUlON1zLFXOeh1jDHd12VYr4eRSw_TBmHXzcmczsYc,899
bohra/modules/kmc/meta.yml,sha256=1VWFgjAtd9eSxyAw0lk0v3v5YewD_ZRkc0Uj4cT5RT4,1513
bohra/modules/kraken2/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/kraken2/main.nf,sha256=NIzUPUf5ZTMpWgWuQlOnhPeHD5Rl4iEYEy09qKpFf5c,1289
bohra/modules/kraken2/meta.yml,sha256=Pon24iOTIjiwjW8ux1EgUKSjXfO_QL5H_8gv7DhNSbc,1844
bohra/modules/lissero/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/lissero/main.nf,sha256=D7Vhn09c70Ct0DAXVrNOozZxq2za5dpuFXpdzN14h0Y,1358
bohra/modules/lissero/meta.yml,sha256=_Ftyd59qAOK2JQn9q5gZVJo29VjNcAgdxxvNurYd9Y0,1511
bohra/modules/mash/sketch/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/mash/sketch/main.nf,sha256=gziOZnsxvLmv1gKoRnS6XgWsL42ova40pfG2mqZ9jn4,1068
bohra/modules/mash/sketch/meta.yml,sha256=kzEiK_pHYxhzcwW-ZTY_aWU4pBb2zzFa8_Q4OS2ni2s,1594
bohra/modules/mash/triangle/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/mash/triangle/main.nf,sha256=0oAouppCs4KCaSNVEYmWR4BMx4BKgKOC4nXnUfQnBYA,1075
bohra/modules/mash/triangle/meta.yml,sha256=kzEiK_pHYxhzcwW-ZTY_aWU4pBb2zzFa8_Q4OS2ni2s,1594
bohra/modules/meningotype/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/meningotype/main.nf,sha256=h8nLAslmArGI6xxwv59-gw576UiMlZ2kEGbNIjaRDhE,1349
bohra/modules/meningotype/meta.yml,sha256=PwHh4bFrN7ZpUvtWyHny8ar0bonl7GJgcJsYLP3Xiqk,1644
bohra/modules/mlst/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/mlst/main.nf,sha256=zUETBjGQRBU2g1ZCzIQazBdC259yLKAKxWtgLXBuCHc,1433
bohra/modules/mlst/meta.yml,sha256=Lsdc-onQAp26da4hcL1NRE-fAFGbg_fmOSt3JmLk-3c,1535
bohra/modules/mobsuite/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/mobsuite/main.nf,sha256=eV2p1W2vkiIxg_84K-58J2QUSt9TiRkTptJTBOSokqY,1361
bohra/modules/mobsuite/meta.yml,sha256=tyAAO1UaGZoUSissaBjm_L0uw9Umt95oOVknuhWIe6w,1870
bohra/modules/ngmaster/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/ngmaster/main.nf,sha256=wqfhKfby4_NWGcXR-vXyZfaFFW6LJ_P9IUofLMwaY9o,1135
bohra/modules/ngmaster/meta.yml,sha256=PwHh4bFrN7ZpUvtWyHny8ar0bonl7GJgcJsYLP3Xiqk,1644
bohra/modules/panaroo/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/panaroo/main.nf,sha256=kI13ALjZVPuQ0tWUOrCih-kKMMgJsAJEU-tOI6Uidso,1226
bohra/modules/panaroo/meta.yml,sha256=Pon24iOTIjiwjW8ux1EgUKSjXfO_QL5H_8gv7DhNSbc,1844
bohra/modules/prokka/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/prokka/main.nf,sha256=nvNNKFiyXYXBsczXuQbG7MDe3WEO1THIHKIuH8KruS4,1150
bohra/modules/prokka/meta.yml,sha256=tyAAO1UaGZoUSissaBjm_L0uw9Umt95oOVknuhWIe6w,1870
bohra/modules/quicktree/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/quicktree/main.nf,sha256=HSXdUVQsLQjEgO8Gq-9P85_z6awmSMuy6CS2CITnZcQ,1109
bohra/modules/quicktree/meta.yml,sha256=kzEiK_pHYxhzcwW-ZTY_aWU4pBb2zzFa8_Q4OS2ni2s,1594
bohra/modules/resistome/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/resistome/main.nf,sha256=7ZS_dveMYFkKoaMXb6bBBqUO4YYCn6f7ZxWwBSVtA9c,2944
bohra/modules/resistome/meta.yml,sha256=F5VH-TUvSo1AT_C4NgVUrAoXiPeR5HAdPbprM4vdeh0,1834
bohra/modules/resistome/bin/combine.py,sha256=OqgzH6piYafSimTP6GOMWuxl8ISjzUJgChTiecNFnQ4,1118
bohra/modules/resistome/bin/concat.py,sha256=4M3hJ8dSOpEFpblYY5Offeh5jLKQlvlsAE5LeZKYXTE,656
bohra/modules/resistome/bin/meta.yaml,sha256=1wCZS3jucKqsVXBQcmwMaaPIygo2cWsGXKuTXLk08d4,1789
bohra/modules/roary2svg/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/roary2svg/main.nf,sha256=_ndsMIqR7gxql5030vr_icwEVg7zrjS7_zHmXdHKtnA,712
bohra/modules/roary2svg/meta.yml,sha256=Pon24iOTIjiwjW8ux1EgUKSjXfO_QL5H_8gv7DhNSbc,1844
bohra/modules/roary2svg/bin/roary2svg.pl,sha256=--q4oc2kzO5KihI4bIht8R7iLZD6w5kipBtRqzrrjRc,5179
bohra/modules/seqkit/fx2tab/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/seqkit/fx2tab/main.nf,sha256=wf3Tzjo1kKCgjXq4BUNVAP0FaOI9ZwsdyawZuLakx3Y,1467
bohra/modules/seqkit/fx2tab/meta.yml,sha256=kzEiK_pHYxhzcwW-ZTY_aWU4pBb2zzFa8_Q4OS2ni2s,1594
bohra/modules/seqkit/stats/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/seqkit/stats/main.nf,sha256=hYSXZn2SgAGkAze0TxY553NQHfyL_vUPud0HraBkRdc,1576
bohra/modules/seqkit/stats/meta.yml,sha256=kzEiK_pHYxhzcwW-ZTY_aWU4pBb2zzFa8_Q4OS2ni2s,1594
bohra/modules/seqtk/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/seqtk/main.nf,sha256=YbVUnHBda0HP0E8p5RHkXR_xtqoOciNv4rxDeAoyB3Y,1138
bohra/modules/seqtk/meta.yml,sha256=kzEiK_pHYxhzcwW-ZTY_aWU4pBb2zzFa8_Q4OS2ni2s,1594
bohra/modules/shovill/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/shovill/main.nf,sha256=CbztsDH-OYKBfgzGEyuEW_Cp2y09C4ymgJLUpFOsJ00,1301
bohra/modules/shovill/meta.yml,sha256=tyAAO1UaGZoUSissaBjm_L0uw9Umt95oOVknuhWIe6w,1870
bohra/modules/skesa/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/skesa/main.nf,sha256=fTkBehx8vR0-tasvF3FulpTHWPCJYcInjKnQx_64YTQ,1283
bohra/modules/skesa/meta.yml,sha256=tyAAO1UaGZoUSissaBjm_L0uw9Umt95oOVknuhWIe6w,1870
bohra/modules/snippy/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/snippy/main.nf,sha256=eE6CDnSdYY9lNmptagL6m1KRdihbkukq4NYqpTZ68bM,1669
bohra/modules/snippy/meta.yml,sha256=tyAAO1UaGZoUSissaBjm_L0uw9Umt95oOVknuhWIe6w,1870
bohra/modules/snippy_clean/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/snippy_clean/main.nf,sha256=4-oNoCUqaJGo6BqQxvFoHDrIn2dSnURZNKTwJnNFcuU,950
bohra/modules/snippy_clean/meta.yml,sha256=tyAAO1UaGZoUSissaBjm_L0uw9Umt95oOVknuhWIe6w,1870
bohra/modules/snippy_core/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/snippy_core/main.nf,sha256=soEvTvWKNHkRHLeqc5wSZ0n5VIInRkEAA5pKvdwft5g,1356
bohra/modules/snippy_core/meta.yml,sha256=tyAAO1UaGZoUSissaBjm_L0uw9Umt95oOVknuhWIe6w,1870
bohra/modules/snp_dists/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/snp_dists/main.nf,sha256=-VzPmeAndmqu_bLMdJo-yNVmVJ40xeT0Af7nPse5ibk,1101
bohra/modules/snp_dists/meta.yml,sha256=tyAAO1UaGZoUSissaBjm_L0uw9Umt95oOVknuhWIe6w,1870
bohra/modules/spades/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/spades/main.nf,sha256=49GIyoRdRvrpHAs-Vo-wVqqNnBZy1_wIpNhTb4JqTRU,1368
bohra/modules/spades/meta.yml,sha256=tyAAO1UaGZoUSissaBjm_L0uw9Umt95oOVknuhWIe6w,1870
bohra/modules/stype/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/stype/main.nf,sha256=rSdsNO_4Dw2GbJfwh21heyL1eSvKQnh05DOHwDjtFew,1433
bohra/modules/stype/meta.yml,sha256=PwHh4bFrN7ZpUvtWyHny8ar0bonl7GJgcJsYLP3Xiqk,1644
bohra/modules/utils/functions.nf,sha256=GC3q-7VUQ9cCKCJlU2wLHuxIq91bFSfyjTMCxsVoYQQ,2025
bohra/modules/utils/main.nf,sha256=8gGpK4AMipfOZQvq_aQuVIirKO6ye_PKFjTy-im7vfU,19267
bohra/modules/utils/meta.yml,sha256=Pon24iOTIjiwjW8ux1EgUKSjXfO_QL5H_8gv7DhNSbc,1844
bohra/modules/utils/bin/extract_species.py,sha256=_JqHGiDP9dIABEX8_Ic69BxZklc5gGL_90TXfQNZNEs,258
bohra/templates/cluster.tmpl,sha256=52OfMgGWXpcLuRhRhmwF_Aggmj0Fydi0QqYs3_O21yQ,932
bohra/templates/config_snippy.yaml,sha256=MMdkIYU35PlgFrR3M448i01mCdx92Z_fECZU6netJgU,806
bohra/templates/index.html,sha256=jRz-1pqAjn5mXtPsIzBU3v7OQySg1xob6QsORM6LVG4,17087
bohra/templates/report_analysis.json,sha256=8PXgkaxO2epQe6-1KPeZKRP06uDkUb539_9gKJrEUGM,34714
bohra/tests/test.bed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
bohra/tests/test.gbk,sha256=oHcgJA4fDqBpHLLE8R5y7liGbJB_FgTsomKT8ICRKUw,7163607
bohra/tests/test.tab,sha256=4YYkw5ftVLfMiVH_xJd522hv3Mcw19wdguDMjNxkNtE,788
bohra/tests/test_bohra.py,sha256=sYFZe7kAnzBhq0FarRTahGRVwcVxMdcEoQZ-lhbPp3o,2172
bohra/tests/test_file.txt,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
bohra/workflows/assemble.nf,sha256=tSWRhYtrgmYN6Npqww1wTf1M8tqg9BIMQ6p6ck6Y-IM,1566
bohra/workflows/collation.nf,sha256=xLyRJPclRk8A5C6GAxyfDVF6ugeDqjnrZLAK4YOkZBo,656
bohra/workflows/default.nf,sha256=oTN-hOJBT9awz2IZIR642edBx7Lep-xErMAFj-rSpxo,4662
bohra/workflows/pangenome.nf,sha256=rrOaW6nartobf88ig37mM-NfH3nlk0Zjko_769cHW2c,375
bohra/workflows/preview.nf,sha256=eE-1ccx4hnC2ywc1y12JIQgQDD-YK16Tv5WMCMerFuw,542
bohra/workflows/read_assessment.nf,sha256=dwMgzLL5ks0e6fao5NaANo29SKKPSoyAuBkhAxsxKiE,941
bohra/workflows/snps.nf,sha256=6DMFJ4J_0Y6RlvCmo-TnCm5ZoirxlMJIvoGlW6Xds5g,1555
bohra/workflows/species.nf,sha256=QcPKet2v7EADDSgsygEZiKl6DsF7K6RgyNhBe48kOv8,578
bohra/workflows/typing.nf,sha256=Ea0CzuOsDNEzLu4MuyoDoHx6-fxYqy2RoO45LF_H6d4,4401
bohra/workflows/versions.nf,sha256=HMQWpaPs14s7V0NmtzEQ0mG387Q9Og2lwXjCXQGTeVg,9848
bohra-2.3.1.dist-info/LICENSE.txt,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
bohra-2.3.1.dist-info/METADATA,sha256=veUuIhQlBUDlFjS9widtfnsuWRCnPYG5V5y-_VG-_CI,3372
bohra-2.3.1.dist-info/WHEEL,sha256=OqRkF0eY5GHssMorFjlbTIq072vpHpF60fIQA6lS9xA,92
bohra-2.3.1.dist-info/entry_points.txt,sha256=ky0HclB5y1QXB2ceSeuG_y23roZNXEagowy2kk-vlJw,44
bohra-2.3.1.dist-info/top_level.txt,sha256=8SMDzL5_sia4XcH6NaHQr_mxExkJQXzZp0hdCpgG63Y,6
bohra-2.3.1.dist-info/RECORD,,
