Metadata-Version: 1.0
Name: bbcu.reportIlluminaInterop
Version: 1.0.0
Summary: Create SAV statistics
Home-page: UNKNOWN
Author: Refael Kohen
Author-email: refael.kohen@weizmann.ac.il
License: UNKNOWN
Description: # bbcu.illuminaInterop
        
        The package creates file with statistics of sequencing run (Next-seq or High-seq machines of illumina).
        
        The run command is:
        
        bbcu.illuminaInterop-1.0.1/bin/run-sav-stat.py --input-folder INPUT_FOLDER --output-file OUTPUT_FILE
        
        INPUT_FOLDER - Run folder of the machine. Need to looked like this: 180717_NB551168_0163_AHF727BGX7
        OUPUT_FILE   - Your name for the output file (with .txt extension).
        
        
        =====================================================================
        
        Example of output files are under "examples" folder.
        
        You can convert it to pdf with the commnad: 
        
        pandoc -o OUTPUT_FILE.pdf  --variable=geometry:landscape OUTPUT_FILE
        
        
        
        
        
        
        
Platform: UNKNOWN
