.gitattributes
.gitignore
.readthedocs.yaml
LICENSE
README.md
framework.png
logo.png
pyproject.toml
requirements.txt
setup.py
docs/conf.py
docs/index.rst
example/PBMC.h5ad
example/batch_simulated_scib.ipynb
example/fitness.ipynb
example/normalization_full_dataset.ipynb
example/normalization_simulated_batch.ipynb
example/pbmc.ipynb
example/spectrum.ipynb
example/spectrum_cancer.ipynb
example/tica.ipynb
example/embeddings/fitness_X.vec
example/embeddings/fitness_X2.vec
example/embeddings/fitness_X_avg.vec
example/embeddings/spectrum_cancer.vec
example/embeddings/spectrum_cancer2.vec
example/embeddings/spectrum_cancer_022.vec
example/embeddings/spectrum_cancer_0222.vec
example/embeddings/spectrum_cancer_022_avg.vec
example/embeddings/spectrum_cancer_022_v2.vec
example/embeddings/spectrum_cancer_022_v22.vec
example/embeddings/spectrum_cancer_022_v2_avg.vec
example/embeddings/spectrum_cancer_022_v3.vec
example/embeddings/spectrum_cancer_022_v32.vec
example/embeddings/spectrum_cancer_022_v3_avg.vec
example/embeddings/spectrum_cancer_X.vec
example/embeddings/spectrum_cancer_X2.vec
example/embeddings/spectrum_cancer_X_avg.vec
example/embeddings/spectrum_cancer_avg.vec
example/embeddings/spectrum_cancer_v2_avg.vec
example/embeddings/tica.vec
example/embeddings/tica2.vec
example/embeddings/tica_avg.vec
example/references/Reactome_2022.txt
example/references/c8.all.v2022.1.Hs.symbols.gmt.txt
example/references/dfcomb.csv
example/references/hgsc_v7_major.yaml
example/references/rsim_mi.pkl
example/references/trrust_rawdata.human.tsv
genevector/__init__.py
genevector/data.py
genevector/embedding.py
genevector/model.py
genevector.egg-info/PKG-INFO
genevector.egg-info/SOURCES.txt
genevector.egg-info/dependency_links.txt
genevector.egg-info/requires.txt
genevector.egg-info/top_level.txt