biopipen/__init__.py,sha256=4ugx3Ez4mAQGMkCr35ZpdUVIi1vQ1a21kY_kpIk--_w,24
biopipen/core/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
biopipen/core/config.py,sha256=edK5xnDhM8j27srDzsxubi934NMrglLoKrdcC8qsEPk,1069
biopipen/core/config.toml,sha256=sEpvNX31ZL0XF2OpJ5tk_YJzLTwjkTf0I8-TvUfXQ3o,1598
biopipen/core/defaults.py,sha256=yPeehPLk_OYCf71IgRVCWuQRxLAMixDF81Ium0HtPKI,344
biopipen/core/filters.py,sha256=ikq2GHXhM32eUrmN5ngvRYvhL8E2qh1oTfYEJU6yk4Q,3844
biopipen/core/proc.py,sha256=7TsjBM7EEtMMB-w4jbxV_CSRY8J970gM8320Ga1YeHU,717
biopipen/core/testing.py,sha256=mX5mmDaIHKRbVye_-o5BxPV2ZnkACyvSKLuMEIRd7ts,1458
biopipen/ns/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
biopipen/ns/bam.py,sha256=5AsYrB0mtr_mH6mCL6gjJ5rC4NywpjFkpFjUrBGp7Fk,9301
biopipen/ns/bcftools.py,sha256=puCDfIL-1z6cz2y1Rlz-ESNIr8xJgeIjEQ440qicCvM,3467
biopipen/ns/bed.py,sha256=Gu6ctc56NkkuSHoXjJ_fgWXXTCJMtedrtZ8GUX2WEo8,5380
biopipen/ns/cnv.py,sha256=t5FhVggugjngqsbgd4R7AEgqV2jdHvWkNU75wZIGwKU,6489
biopipen/ns/cnvkit.py,sha256=5mA2Q8-YDs4g1HoxtpB_NWnyZYwEThNr3s3wlubLQrQ,31130
biopipen/ns/cnvkit_pipeline.py,sha256=_9OusUwS4avpuaqa4TOra74-7pcMbhczTNPrxctrNyM,36769
biopipen/ns/csv.py,sha256=i_Z_8EawzjBCckX5BIIiqsEsnuyDb8uSir5nIQHBkKc,511
biopipen/ns/gene.py,sha256=Q5FzRByfnRITXRNRZR65ApG09FRyiihRC3TcIXxufzE,2228
biopipen/ns/gsea.py,sha256=rM_Klmta2C4IxIzJi4T_SjQSBHzRNaoQELWRWH-m-QM,7423
biopipen/ns/misc.py,sha256=okR3uPJeGBvW8SzaJr_e3ejBqIPZbnPjvXMCR-wJJA0,3099
biopipen/ns/plot.py,sha256=yguxmErUOH-hOM10JfuI_sXw2p49XF8yGR_gXfbd5yQ,4066
biopipen/ns/rnaseq.py,sha256=l4vFeRasGhkexopGTM_VfSyIFewOxg-9L5niFzhWUNA,565
biopipen/ns/scrna.py,sha256=yaVM1yvdNbTzMatZ86c5YMjiHLMzcAt7Ppl70E5pYcg,45973
biopipen/ns/scrna_basic.py,sha256=THUlBuugYOQpCYHdnn2tfMyPS1EmeYTGUoIu912qJLs,8549
biopipen/ns/scrna_metabolic_landscape.py,sha256=af-7iaAibl5gLKvVEjbYGlDgyg3SE6ZkJ9ym-k6X1NU,25606
biopipen/ns/tcgamaf.py,sha256=AFbUJIxiMSvsVY3RcHgjRFuMnNh2DG3Mr5slLNEyz6o,1455
biopipen/ns/tcr.py,sha256=woA2ycuPy7XSSVxklDPK880IGgdgGV2SRVPe1ge2QkQ,33719
biopipen/ns/vcf.py,sha256=cdkKroii0_nl_bSP2cnO09qESUAhHqu6btOiTSKS79Y,15314
biopipen/ns/web.py,sha256=3zucrDo-IVsSnIvlw-deoScuxqWa6OMTm8Vo-R4E44Q,2224
biopipen/reports/bam/CNAClinic.svelte,sha256=D4IxQcgDCPQZMbXog-aZP5iJEQTK2N4i0C60e_iXyfs,213
biopipen/reports/bam/CNVpytor.svelte,sha256=s03SlhbEPd8-_44Dy_cqE8FSErhUdqStLK39te5o7ZE,1364
biopipen/reports/bam/ControlFREEC.svelte,sha256=OwN96RW0dN-gtQ1zWKbXYZCYkkrOC0RQmP3UG4x7zqU,837
biopipen/reports/cnv/AneuploidyScore.svelte,sha256=x0LbhqjauZpqMzmzDWmYgx-rEh5Tzo8qBrXcLcM0h78,1020
biopipen/reports/cnv/AneuploidyScoreSummary.svelte,sha256=aXe-JNx3ItMrU89FEQX6J5_yb9O5q-LSW8NboNaU8OA,4412
biopipen/reports/cnv/TMADScoreSummary.svelte,sha256=tJutaMOqeXxKroAosOIqOJVyhTTFet-soMwuOYVHTYU,2060
biopipen/reports/cnvkit/CNVkitDiagram.svelte,sha256=8QLihBVH8RaHtjOUTU7xh4CCmFyxO1Bb9oOvLkOHeVo,467
biopipen/reports/cnvkit/CNVkitHeatmap.svelte,sha256=IhwSvEdx3h-LZuwKN3vgiUIW8MD7a280YXqL_xNvIOA,519
biopipen/reports/cnvkit/CNVkitScatter.svelte,sha256=8QLihBVH8RaHtjOUTU7xh4CCmFyxO1Bb9oOvLkOHeVo,467
biopipen/reports/gsea/FGSEA.svelte,sha256=3gNbZovmRWK6QjtxfgZgmft6LUurVZfQyHBRqyGMosk,405
biopipen/reports/gsea/GSEA.svelte,sha256=lYHf8h8RLx3i-jNCEGu_LM-dbYm9ZJDzyAEadsZXzmQ,417
biopipen/reports/scrna/CellsDistribution.svelte,sha256=4Q2zzMLKz4dnS-C22XbHoAjlQmWzSAQrfcLspPisHKI,582
biopipen/reports/scrna/DimPlots.svelte,sha256=ZLbtN0ioevRyEky4jb_DkDGAcpy_jAhaHfFym5ELEPM,479
biopipen/reports/scrna/GeneExpressionInvistigation.svelte,sha256=nsWHX5VaRSIbUYSFKYcBZaeJIxuUlk5UItA7WPK4clY,793
biopipen/reports/scrna/MarkersFinder.svelte,sha256=cKSnbI0QIuREVXwgqOoycaNrPo9dglmfYb7njhwJcxs,1802
biopipen/reports/scrna/ScFGSEA.svelte,sha256=bq_zZD6YujgnikTYCF1yAgpj-MdzJvEqpbkqswLZAec,906
biopipen/reports/scrna/SeuratClusterStats.svelte,sha256=nyWRYZ5agJqedfeeGbvIlBN1dGheT3PfAa-U_6A1tPM,4971
biopipen/reports/scrna/SeuratMap2Ref.svelte,sha256=SYuoKJR1PuBf9c7WvUXXjmokVo-JxFLqZqiu9kTtLuY,542
biopipen/reports/scrna/SeuratPreparing.svelte,sha256=PHeL_prMFTZ-tddhUHG3O6dGUL2ygNNnMEAeHzZVq-k,1182
biopipen/reports/scrna_metabolic_landscape/MetabolicFeatures.svelte,sha256=1AHjiInGLev1_gfis5oVegYXgKLzDXA9qMwEgPqRDfI,880
biopipen/reports/scrna_metabolic_landscape/MetabolicFeaturesIntraSubset.svelte,sha256=XYCaO6HTQ5H5M0yWh6Pf9xzxcfwAFt9fICXBcINAOZw,993
biopipen/reports/scrna_metabolic_landscape/MetabolicPathwayActivity.svelte,sha256=0rHqUyciqPq7w-5mEoQRTPrqbqszkLV8zcZjZ6UXwI4,3167
biopipen/reports/scrna_metabolic_landscape/MetabolicPathwayHeterogeneity.svelte,sha256=Aj9m2TVmjwLleFapmIY_iB5afDuTZr3s5AIm_qbQcGw,608
biopipen/reports/tcr/CDR3AAPhyschem.svelte,sha256=mdpD9sJxyDulLMV1Ph6IZ_OIKsHhKQjLxC4cfBJRiA8,3212
biopipen/reports/tcr/CloneResidency.svelte,sha256=b7P9v6fgUPQe9OlQdBKyLqspK4mACatgfm1ywEeYqhE,2929
biopipen/reports/tcr/Immunarch.svelte,sha256=0PZGqh3sZxx3rOBmiGJ0cEBqk16_2AmayM-COmgWWOA,7851
biopipen/reports/tcr/SampleDiversity.svelte,sha256=GrPUpQ6aJPtyQHoFL9ayG6knpW6yZznqwo0ZVZ2tMl4,5524
biopipen/reports/tcr/TCRClusteringStats.svelte,sha256=tQLh05juuBDYBdoXmQfMJoNIBwUSZA-ms3PeO_wLoJs,3757
biopipen/reports/tcr/VJUsage.svelte,sha256=c9G2-APGG0l-c6b32aFOimrP_QYD-oELBASN4VabXmk,426
biopipen/reports/utils/gsea.liq,sha256=5jfL_UHzkQicLjWJKqwOx9HTdtd7smEu0JBCzyOnx9A,2627
biopipen/reports/utils/misc.liq,sha256=HLK3mkWtIMQqBtM2IIRFUdKKTcY8cvBtyHJB9DbWBdw,1653
biopipen/reports/vcf/TruvariBenchSummary.svelte,sha256=yew8HRN-YahBzX504Micah5BTnoL_PQzQfN_87TiuOA,577
biopipen/reports/vcf/TruvariConsistency.svelte,sha256=BBvtxi1EPmGH7j5M5zMOcLEhKWZOlKoXp1lrQGAmz_0,647
biopipen/scripts/bam/BamMerge.py,sha256=jyaJI0-TulAxaCzvrYjC8PujH_ECNInevnPbh2_XQtU,3477
biopipen/scripts/bam/BamSplitChroms.py,sha256=b7GS2I4X0dLOhlPg_r9-buoIHTWlq6zHI3Rox94LXR8,4893
biopipen/scripts/bam/CNAClinic.R,sha256=XH-J_RHMb5zh0jkaIa2UMivi13ckKZTyGWO2NxZRvQc,5000
biopipen/scripts/bam/CNVpytor.py,sha256=5eeYgdaxOmEXRJtH1ws_CE42QmLYosXlGZln4o_aey0,12296
biopipen/scripts/bam/ControlFREEC.py,sha256=xePG3UlIdr1hxITcF4nY_LtrBb5B9no_LUCtD6WQZWg,3142
biopipen/scripts/bcftools/BcftoolsAnnotate.py,sha256=5mdyp7UF11ok37QqnvPVs16_7v2EKmaT8hDpj4EvQhM,1343
biopipen/scripts/bcftools/BcftoolsFilter.py,sha256=3i8hWAaxAnhIGXbr_uK2Xa9xI_n97eT0gBPXzrkOL2Q,2284
biopipen/scripts/bcftools/BcftoolsSort.py,sha256=5YYTCsNkE7vqnK9dH9HeBKZUhpc5uxUlyyfGJJmtXoc,549
biopipen/scripts/bed/Bed2Vcf.py,sha256=kpMbrLhwwYGcaL5ys1_l4stCEqJ7OhTNJCnnLjkyswU,5016
biopipen/scripts/bed/BedConsensus.py,sha256=Q7iQUqGa3IycrpgiEFBKda8NwowblTuF4qr9d7zgn80,2082
biopipen/scripts/bed/BedLiftOver.sh,sha256=Y4gBsz9w4zhE29UmWojO6F4PXMMMWC1uCzjrxa19eOs,256
biopipen/scripts/bed/BedtoolsMerge.py,sha256=uECEBKLDXQ_AJz_r5OXz5teah_CqdvVIU_-pTO3C66s,517
biopipen/scripts/cnv/AneuploidyScore.R,sha256=9U8pbbs_jcOOLlUoBbdGqKRKs9WpvkKmmTvj7TRPUP4,8367
biopipen/scripts/cnv/AneuploidyScoreSummary.R,sha256=ipWv84PHvXOXyio-VPJXnP6L_BCcl_7cXMKhm_TvkCQ,12168
biopipen/scripts/cnv/TMADScore.R,sha256=uCLHQR6sMt-4uVUAEJlJxYXlai9ZE5J7xBl0sl-EkjU,1065
biopipen/scripts/cnv/TMADScoreSummary.R,sha256=xcuEzHpzPNWWdZlurp5PS4D7665ZvIJtc4739pFACPI,7003
biopipen/scripts/cnvkit/CNVkitAccess.py,sha256=PkQITl0LTU9LZY0cIvLbVNg2rYK5aHHmJs0xdDj-OaA,558
biopipen/scripts/cnvkit/CNVkitAutobin.py,sha256=g-jISfeFDGZsEebvXJmphRYeyb5yTgOlVjtF40t8G0g,1496
biopipen/scripts/cnvkit/CNVkitBatch.py,sha256=R9FEonrtcyaGV5_gCWgN9olDqyxkiWRwKezWShODG0s,3596
biopipen/scripts/cnvkit/CNVkitCall.py,sha256=NyOnMjwT4w-ID9YtNks6fp6BIG7OzkGHmYphcXzAy_M,3544
biopipen/scripts/cnvkit/CNVkitCoverage.py,sha256=yC0VlCUoygBQI-J1WZYh6Q9Pn91rZuxxzk8FfsI2MgQ,679
biopipen/scripts/cnvkit/CNVkitDiagram.py,sha256=DxeO5NnNmnoYCQKLxBD98XchnkB2eojkyV4B_tduqW0,1709
biopipen/scripts/cnvkit/CNVkitFix.py,sha256=3l980QLlBvPjJSPGRSYuxhMFZqwqbwQFRxMhNZ9-F28,981
biopipen/scripts/cnvkit/CNVkitGuessBaits.py,sha256=Fr58IbD-Q29pHBoblf48dWv8WXczu5_VITN1Cuqhtig,2334
biopipen/scripts/cnvkit/CNVkitHeatmap.py,sha256=skK3PoP1HW-ulfZW9b6_MCEk3ETn8xS7Svxg8Mb6BGc,2298
biopipen/scripts/cnvkit/CNVkitReference.py,sha256=o02tX-psbzGOS4ugJAK9SAy3PMDqJpRlTVXIXua-Pb0,1253
biopipen/scripts/cnvkit/CNVkitScatter.py,sha256=H_xsWLZQxhHLNEI_bUYwnnmzsDjXCC8xH_N52u5Ym04,2574
biopipen/scripts/cnvkit/CNVkitSegment.py,sha256=h1alr6tBHyNakJEokjwQWTGsdJITDzCV4ub0o5vO5_A,1499
biopipen/scripts/cnvkit/guess_baits.py,sha256=7OCMtSMHIJWWZv9qEYVXnB0N4hU_JaGEesKdkr6tvJc,10586
biopipen/scripts/csv/BindRows.py,sha256=JbUcRPtYMNNtpADYCfg96XlZQL1zF1JkERAG2lntOyY,900
biopipen/scripts/gene/GeneNameConversion.py,sha256=2RveardTsLv2K1XSj3G0ERYLiln9bcR74bjkRdKcChc,1880
biopipen/scripts/gsea/Enrichr.R,sha256=tr4vInlVIeiGXumh22ARuTQmy0-Qq869RiX7d7ERqCg,661
biopipen/scripts/gsea/FGSEA.R,sha256=RLqDgrqnYEacHfzEEuZ3d29lxNqWehigOnGuu248SRg,1483
biopipen/scripts/gsea/GSEA.R,sha256=PJ6Og9BhsMfX9lHpUT6IA6JqLD73lWvmUV9jU7yRg4A,1059
biopipen/scripts/gsea/PreRank.R,sha256=onZK1FQa6yDO0Fz4juy56XQjpzyw3zBdZv7edY9acNI,1356
biopipen/scripts/misc/Config2File.py,sha256=NUio0uOEuZtUBpuByDSItYu9Kwu5mosb4pdPq5-QAmE,440
biopipen/scripts/misc/Str2File.py,sha256=99oQNxChxChNJ9vmD77b48cu-r_P_heSpx7A5wi3qTE,212
biopipen/scripts/plot/Heatmap.R,sha256=_9c3OuO3bysf9XgfOpECmqnUcHJPxXJiv3LbkEaiedg,1942
biopipen/scripts/plot/VennDiagram.R,sha256=GVc-kyHqnXrbXZvy-evcxI1XGtlLSChBiVnMjPywNMA,731
biopipen/scripts/rnaseq/UnitConversion.R,sha256=9etSQ6ivtlrgSg4mLjViZAl8nUtCxfEROxXvFCpN9sg,1928
biopipen/scripts/scrna/CellTypeAnnotate-direct.R,sha256=ZyJOMq_pqqjdPm0tHNKEHv3nIaotICuo65FkhyBYv7E,585
biopipen/scripts/scrna/CellTypeAnnotate-sccatch.R,sha256=07L5WIQm68zgeRmc2lSDUL9kdCTqYiiILea1mdJAHuQ,1329
biopipen/scripts/scrna/CellTypeAnnotate-sctype.R,sha256=OdtbkBeat_nMBO7I_X4VFDJB3feHsYCjsjuHO3Td2EQ,2547
biopipen/scripts/scrna/CellTypeAnnotate.R,sha256=YgdMDjjZbIhPNqc_7olM71szR8TjxK0ZxYPaGpGv3HY,384
biopipen/scripts/scrna/CellsDistribution.R,sha256=vnAqv3ze4u1EfwjMdCKYjY628nis2tOYdruHP9XS7Fw,2827
biopipen/scripts/scrna/DimPlots.R,sha256=564ud7JvvujnvfRZ2DzUXlW0v8Te6g1HI9W9cxkuNOA,1513
biopipen/scripts/scrna/ExprImpute-alra.R,sha256=NEETlKx20e3uR5hKvTwvtuJqsc71w9S7Mgg-ikAH6kY,741
biopipen/scripts/scrna/ExprImpute-rmagic.R,sha256=yYnkyVfqIaNynsbaZZLGS6DrAJ_XhVQj1Ox598w8yOY,651
biopipen/scripts/scrna/ExprImpute-scimpute.R,sha256=mg40qCUW7-nP5oHPvARq7dmtoahM0GRFWXQpum0BXVk,1082
biopipen/scripts/scrna/ExprImpute.R,sha256=TuyBmK_hH9g4Jb36RHR0y2RQ8TxS9c6htrFaH6Vog3M,307
biopipen/scripts/scrna/GeneExpressionInvistigation.R,sha256=Qa_Gc_jhvsNCsEmI6bD_cZx8xaHznltTJd8wXt45quY,3760
biopipen/scripts/scrna/MarkersFinder.R,sha256=7rXNKyPJVNHusAGJsy4UXlz3sY6m2uGa3_ziKJtHMgU,4701
biopipen/scripts/scrna/SCImpute.R,sha256=dSJOHhmJ3x_72LBRXT72dbCti5oiB85CJ-OjWtqONbk,2958
biopipen/scripts/scrna/ScFGSEA.R,sha256=uiJ_SAPjRYl-uKlIpFxo1dA1w1o-my4LLlXfwsE1AW0,4525
biopipen/scripts/scrna/SeuratClusterStats.R,sha256=GVuVWaANSrYnHaFh5LGKEIh4MBdTf0rI9Kx1n8Qe2Xk,14667
biopipen/scripts/scrna/SeuratClustering.R,sha256=dkmO-rxOgUBXAMIAB0joJee13RnmAlDP9n_Yzdhz8Qg,6287
biopipen/scripts/scrna/SeuratFilter.R,sha256=BrYK0MLdaTtQvInMaQsmOt7oH_hlks0M1zykkJtg2lM,509
biopipen/scripts/scrna/SeuratLoading.R,sha256=kEOBAS18rEsTsQrQ0vLGvAKH4e9RXyZP_pPMbnOKlHw,897
biopipen/scripts/scrna/SeuratMap2Ref.R,sha256=TkDSDc5do6BOtkAq3fS5HpjyqWUwsu8YqRC5in62oz8,3750
biopipen/scripts/scrna/SeuratMetadataMutater.R,sha256=m-5wU7L-ipTIXJLf34KzaG1FZHPtD-XiTtT5YqCrZxI,616
biopipen/scripts/scrna/SeuratPreparing.R,sha256=FyPaAvlDmbhYKhbnAoecjO95zz-kZufcZESuMI9HP0A,5381
biopipen/scripts/scrna/SeuratSplit.R,sha256=vdK11V39_Uo_NaOh76QWCtxObGaEr5Ynxqq0hTiSvsU,754
biopipen/scripts/scrna/SeuratSubset.R,sha256=yVA11NVE2FSSw-DhxQcJRapns0tNNHdyDYi5epO6SKM,1776
biopipen/scripts/scrna/Subset10X.R,sha256=T2nJBTwOe12AIKC2FZsMSv6xx3s-67CYZokpz5wshqY,2679
biopipen/scripts/scrna/Write10X.R,sha256=EHefujCvOuSTBRtPUVmzJFKo2I7M2zPWDbbmPWmqdxo,284
biopipen/scripts/scrna/sctype.R,sha256=mbNSGE3rHPNvUZnECWvUbhbJvCV5aDT3lyGTRWFv-G4,5428
biopipen/scripts/scrna_metabolic_landscape/MetabolicFeatures.R,sha256=B4Kl3_NOGjbeRQMt8DNUB4r9nOctLL0icTPhvxxu1S8,3331
biopipen/scripts/scrna_metabolic_landscape/MetabolicFeaturesIntraSubset.R,sha256=VY7mlpygMo-gQhDQNcxEj5-Q3fOwdWu2FJfBAbK3hyg,4302
biopipen/scripts/scrna_metabolic_landscape/MetabolicPathwayActivity.R,sha256=8ckD20FP0E0NhJhvKRcoz3zOuE-K4w5sIlUxXuHFcBw,15712
biopipen/scripts/scrna_metabolic_landscape/MetabolicPathwayHeterogeneity.R,sha256=4YMdQOR1DEgKs3OtjoBnjgCeq474db8mdSIvaw1y_bw,8697
biopipen/scripts/tcgamaf/Maf2Vcf.py,sha256=MGc-viCLvfmbLbW7Kc4pN13FdWXIbCkpVc1bSQwb_ek,672
biopipen/scripts/tcgamaf/MafAddChr.py,sha256=V10HMisl12O3ZfXuRmFNdy5p-3mr43WCvy0GHxSpwfA,494
biopipen/scripts/tcgamaf/maf2vcf.pl,sha256=hJKcH-NbgWK6fmK7f3qex7ozJJl-PqCNPXqpwfcHwJg,22707
biopipen/scripts/tcr/Attach2Seurat.R,sha256=kJck_jpjpLhUx1_9vjBeKWCrzI8Gb09nGwUOtp1Ztnk,1315
biopipen/scripts/tcr/CDR3AAPhyschem.R,sha256=Zfs_RFU4RFpDsyzTMQFQOZxLuR-aF35MahW79-_bULE,13149
biopipen/scripts/tcr/CloneResidency.R,sha256=uh06ISraN8l-lR7L_6ooDl7EYXEauEvzFqD0Ac9DydM,9341
biopipen/scripts/tcr/CloneSizeQQPlot.R,sha256=5FPfWQjxTsv59KSDQaDWj3C95zPQMngKG7qOf95NEzI,4527
biopipen/scripts/tcr/Immunarch.R,sha256=qgB5O7N5r15sGMudUlhgtmQ14nAN2nPOwZBnuqak13Q,21251
biopipen/scripts/tcr/Immunarch2VDJtools.R,sha256=QB9ILGbnsfoWaRANK6ceb14wpSWy8F1V1EdEmfIqiks,706
biopipen/scripts/tcr/ImmunarchFilter.R,sha256=o25O36FwH_0w6F8DFQ0SfpcwDzlzaGefXqr9ESrvb4k,3974
biopipen/scripts/tcr/ImmunarchLoading.R,sha256=jxrGdSmMJx1ypO14WL50FajkZ1tLRWd_cwR3I6DHBOs,4508
biopipen/scripts/tcr/ImmunarchSplitIdents.R,sha256=FGCeGV0uSmFU91lKkldUAeV4A2m3hHw5X4GNi8ffGzI,1873
biopipen/scripts/tcr/SampleDiversity.R,sha256=ezXu2xDr2ZWS0IUQd3JvrN_un_fyCBsAsbxoW8_QS2g,2603
biopipen/scripts/tcr/TCRClustering.R,sha256=cusqmNLnuanfozjdOEMjyUF1LMpBxXYV0_-zvCncNgU,8351
biopipen/scripts/tcr/TCRClusteringStats.R,sha256=0_gwTV88FDFBATqGR3w-eHAhg73v23bMw6UkvXxsskc,7136
biopipen/scripts/tcr/VJUsage.R,sha256=LjHEbAHW3WriCYiM9-T6Esd4jc6pnoiSxBKTN_YA490,437
biopipen/scripts/tcr/vdjtools-patch.sh,sha256=rL5qp2S18CrpqduKkeR1HVmmuWhCVJOMKJXvWiKdYIc,566
biopipen/scripts/vcf/TruvariBench.sh,sha256=80yLQ73OzSgsJ4ltzgpcWxYvvX1hFnCG8YSBhhhRQ9Y,765
biopipen/scripts/vcf/TruvariBenchSummary.R,sha256=YlcD9qLtK3aeW3XeLx8pXTe7yOkbaYJyLHb2TYijm8A,1474
biopipen/scripts/vcf/TruvariConsistency.R,sha256=dqoLHCzCeyJ3JWyDX8Q8MzIFwkVK8Jg71Ml45d96Cxg,2293
biopipen/scripts/vcf/Vcf2Bed.py,sha256=LzyJ9qW1s5mbfF8maLc77_0rE98KMc2lq1R94_NFbSU,855
biopipen/scripts/vcf/VcfAnno.py,sha256=2Ry3lFTJN9ohDat4O6ZOtTcBLBgS6jvthx13SFhL7RY,734
biopipen/scripts/vcf/VcfDownSample.sh,sha256=yBlyoA8xyHPkVc1XAs1biNZmN7rDR-CMz8qVh2GGvuk,939
biopipen/scripts/vcf/VcfFilter.py,sha256=0clQi9XuN0B33xAquQ3e7ce1PZlzIOmOFctNA-dpdEw,1881
biopipen/scripts/vcf/VcfFix.py,sha256=r2bgwwb2hAMr42wjpFZSFcUDxGllvhkOaRY_r9sKLNE,1304
biopipen/scripts/vcf/VcfFix_utils.py,sha256=Ev_rvgLY9GF-aNntWbjXbl6eVlubw5uyHUD-g1c6Rno,2294
biopipen/scripts/vcf/VcfIndex.py,sha256=1o18IY9BKb8CYUy8MXMRC4y_6yqg8BL5DTZ8VBxgy4Y,557
biopipen/scripts/vcf/VcfIntersect.py,sha256=Bola-A_OnhpA9CKUuoJ--ijG70J55Fr9xpcNY3Ymgso,808
biopipen/scripts/vcf/VcfLiftOver.sh,sha256=NGlLpJRcwenhbm6jmpgxK6k8VtiERNnNe7uLV6cywGc,562
biopipen/scripts/vcf/VcfSplitSamples.py,sha256=GraKi7WluzDAvVVGljwd3Yif6MriniF8stZOmllZtgk,1528
biopipen/scripts/web/Download.py,sha256=NhtO0-QSQmwM0l4enJVDyoltu2Expn5aAFlbkhGcW74,811
biopipen/scripts/web/DownloadList.py,sha256=z9--Co0HOikTadUDxw57hjlIYPWlyXiOlwfH0ai3Chg,1017
biopipen/utils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
biopipen/utils/gene.R,sha256=BzAwlLA8hO12vF-3t6IwEuTEeLa_jBll4zm_5qe3qoE,1243
biopipen/utils/gene.py,sha256=qE_BqTayrJWxRdniffhcz6OhZcw9GUoOrj2EtFWH9Gw,2246
biopipen/utils/gsea.R,sha256=o3RC-wejsfFXPXzRIpFw22F-aif27qnuKEPavvXIlkc,5794
biopipen/utils/io.R,sha256=jIYdqdn0iRWfQYAZa5CjXi3fikqmYvPPLIXhobRe8sw,537
biopipen/utils/misc.R,sha256=mdSYzsfOKuZfofODcefkQzup23YxOLMLIQQiNbe-2rw,2272
biopipen/utils/misc.py,sha256=lZJovrHKblKYA0SupGet29We91gu75XvVfDmWyDDAvM,2283
biopipen/utils/plot.R,sha256=pzl37PomNeUZPxohHZ2w93j3Fc4T0Qrc62FF-9MTKdw,4417
biopipen/utils/reference.py,sha256=v-4bxaMbX1DwYcJwi0C1q7E4UqL8KQb2c96gzdqgZ1M,4346
biopipen/utils/rnaseq.R,sha256=Ro2B2dG-Z2oVaT5tkwp9RHBz4dp_RF-JcizlM5GYXFs,1298
biopipen/utils/vcf.py,sha256=ajXs0M_QghEctlvUlSRjWQIABVF02wPdYd-0LP4mIsU,9377
biopipen-0.14.1.dist-info/METADATA,sha256=xURXh0QfvHKoXel8PVtm2D5G6PVkdSGwCwgD0i9Xce8,929
biopipen-0.14.1.dist-info/WHEEL,sha256=Zb28QaM1gQi8f4VCBhsUklF61CTlNYfs9YAZn-TOGFk,88
biopipen-0.14.1.dist-info/entry_points.txt,sha256=K9wUvJm9uFSpzqwG-6jRIcEXBg6jqNgYjdi_BL4Uf8o,523
biopipen-0.14.1.dist-info/RECORD,,
