anndata==0.11.4
captum==0.8.0
click==8.1.8
crested==1.4.1
datasets==3.6.0
loguru==0.7.3
matplotlib==3.8.4
modisco-lite==2.3.2
pandas==2.1.4
peft==0.15.1
scikit-learn==1.5.2
seaborn==0.13.2
shap==0.47.1
torch==2.5.1
transformers==4.51.0
wandb==0.19.9

[dev]
mkdocs-material==9.7.4
mkdocs<2.0,>=1.6
mkdocs-jupyter==0.25.1
mkdocstrings-python==2.0.3
mkdocstrings==1.0.3
pymdown-extensions==10.21
pytest==9.0.2
pytest-cov==7.0.0
pytest-xdist>=3.0
ruff==0.15.4
