LICENSE
README.md
pyproject.toml
src/pesto/__init__.py
src/pesto/aliases.tsv
src/pesto/cli.py
src/pesto/config.py
src/pesto/cost.py
src/pesto/credentials.py
src/pesto/harness.py
src/pesto/open_targets.py
src/pesto/ot_matcher.py
src/pesto/ot_shortlist.py
src/pesto/scoring.py
src/pesto/browser/__init__.py
src/pesto/browser/export.py
src/pesto/browser/runner.py
src/pesto/browser/runs.py
src/pesto/browser/server.py
src/pesto/browser/static/index.html
src/pesto/flow/__init__.py
src/pesto/flow/arms.py
src/pesto/flow/render.py
src/pesto/flow/run.py
src/pesto/flow/spec.py
src/pesto/flow/steps.py
src/pesto/flow/store.py
src/pesto/flow/types.py
src/pesto/parsers/__init__.py
src/pesto/parsers/llm_parsers.py
src/pesto/prompts/broad_term_prompt.txt
src/pesto/prompts/evidence_band_general.txt
src/pesto/prompts/evidence_band_prompt.txt
src/pesto/prompts/knowledge_probabilities.txt
src/pesto/prompts/max_date_note.txt
src/pesto/prompts/novelty_assessment_general.txt
src/pesto/prompts/novelty_assessment_prompt.txt
src/pesto/prompts/novelty_probabilities.txt
src/pesto/prompts/novelty_probabilities_bare.txt
src/pesto/prompts/novelty_probabilities_general.txt
src/pesto/prompts/novelty_probabilities_open.txt
src/pesto/prompts/novelty_score.txt
src/pesto/prompts/ot_tagged_gate_prompt.txt
src/pesto/prompts/ot_tagged_match_reasons_prompt.txt
src/pesto/prompts/ot_tagged_match_v7_prompt.txt
src/pesto/prompts/phenotype_anchors_prompt.txt
src/pesto/prompts/phenotype_kind_prompt.txt
src/pesto/prompts/phenotype_synonyms_general.txt
src/pesto/prompts/phenotype_synonyms_prompt.txt
src/pesto/prompts/title_kick_prompt.txt
src/pesto/services/__init__.py
src/pesto/services/fulltext_service.py
src/pesto/services/llm_service.py
src/pesto/services/pubmed_service.py
src/pesto/utils/__init__.py
src/pesto/utils/data_loader.py
src/pesto/utils/helpers.py
src/pesto_genetics.egg-info/PKG-INFO
src/pesto_genetics.egg-info/SOURCES.txt
src/pesto_genetics.egg-info/dependency_links.txt
src/pesto_genetics.egg-info/entry_points.txt
src/pesto_genetics.egg-info/requires.txt
src/pesto_genetics.egg-info/top_level.txt