Metadata-Version: 2.1
Name: bio2bel_kegg
Version: 0.0.6
Summary: A wraper around the KEGG RESTful API
Home-page: https://github.com/bio2bel/kegg
Author: Daniel Domingo-Fernández and Charles Tapley Hoyt
Author-email: daniel.domingo.fernandez@scai.fraunhofer.de
Maintainer: Daniel Domingo-Fernández and Charles Tapley Hoyt
Maintainer-email: daniel.domingo.fernandez@scai.fraunhofer.de
License: MIT License
Description: Bio2BEL KEGG |build| |coverage| |docs|
        ======================================
        This package allows the enrichment of BEL networks with KEGG information by wrapping its RESTful API.
        Furthermore, it is integrated in the `ComPath environment <https://github.com/ComPath>`_ for pathway database comparison.
        
        Installation
        ------------
        This code can be installed with :code:`pip3 install git+https://github.com/bio2bel/kegg.git`
        
        Functionalities and Commands
        ----------------------------
        Following, the main functionalities and commands to work with this package:
        
        - Populate local database with KEGG info :code:`python3 -m bio2bel_kegg populate`
        - Run an admin site for simple querying and exploration :code:`python3 -m bio2bel_kegg web` (http://localhost:5000/admin/)
        - Export gene sets for programmatic use :code:`python3 -m bio2bel_kegg export`
        
        Citation
        --------
        - Kanehisa, Furumichi, M., Tanabe, M., Sato, Y., and Morishima, K.; KEGG: new perspectives on genomes, pathways, diseases and drugs. Nucleic Acids Res. 45, D353-D361 (2017).
        - Kanehisa, M., Sato, Y., Kawashima, M., Furumichi, M., and Tanabe, M.; KEGG as a reference resource for gene and protein annotation. Nucleic Acids Res. 44, D457-D462 (2016).
        - Kanehisa, M. and Goto, S.; KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 28, 27-30 (2000).
        
        
        .. |build| image:: https://travis-ci.org/bio2bel/kegg.svg?branch=master
            :target: https://travis-ci.org/bio2bel/kegg
            :alt: Build Status
        
        .. |coverage| image:: https://codecov.io/gh/bio2bel/kegg/coverage.svg?branch=master
            :target: https://codecov.io/gh/bio2bel/kegg?branch=master
            :alt: Coverage Status
        
        .. |docs| image:: http://readthedocs.org/projects/bio2bel-kegg/badge/?version=latest
            :target: http://bio2bel.readthedocs.io/projects/kegg/en/latest/?badge=latest
            :alt: Documentation Status
        
Platform: UNKNOWN
Provides-Extra: web
