LICENSE
README.md
pyproject.toml
src/bicbioseg/__init__.py
src/bicbioseg/config.py
src/bicbioseg/exceptions.py
src/bicbioseg/trainer.py
src/bicbioseg/workflow.py
src/bicbioseg.egg-info/PKG-INFO
src/bicbioseg.egg-info/SOURCES.txt
src/bicbioseg.egg-info/dependency_links.txt
src/bicbioseg.egg-info/requires.txt
src/bicbioseg.egg-info/top_level.txt
src/bicbioseg/_segmenter/__init__.py
src/bicbioseg/_segmenter/artifacts.py
src/bicbioseg/_segmenter/checkpoints.py
src/bicbioseg/_segmenter/evaluation.py
src/bicbioseg/_segmenter/experiments.py
src/bicbioseg/_segmenter/inference.py
src/bicbioseg/_segmenter/plotting.py
src/bicbioseg/_segmenter/training.py
src/bicbioseg/imageops/__init__.py
src/bicbioseg/imageops/convert_images.py
src/bicbioseg/imageops/other_process.py
src/bicbioseg/imageops/preprocess.py
src/bicbioseg/models/__init__.py
src/bicbioseg/models/_common.py
src/bicbioseg/models/cattention_unet.py
src/bicbioseg/models/dinov3_seg.py
src/bicbioseg/models/doubleunet.py
src/bicbioseg/models/efficientvit_seg.py
src/bicbioseg/models/isnet.py
src/bicbioseg/models/mednext_2d.py
src/bicbioseg/models/options.py
src/bicbioseg/models/pvtformer_full.py
src/bicbioseg/models/registry.py
src/bicbioseg/models/resunetplusplus_full.py
src/bicbioseg/models/segformer.py
src/bicbioseg/models/swin_unet_full.py
src/bicbioseg/models/transformer_segmentation.py
src/bicbioseg/models/transunet.py
src/bicbioseg/models/unet.py
src/bicbioseg/models/unext_full.py
src/bicbioseg/models/licenses/Apache-2.0.txt
src/bicbioseg/models/licenses/NOTICE.txt
src/bicbioseg/utils/__init__.py
src/bicbioseg/utils/augmentation.py
src/bicbioseg/utils/checkpoints.py
src/bicbioseg/utils/environment.py
src/bicbioseg/utils/evaluation.py
src/bicbioseg/utils/load_data.py
src/bicbioseg/utils/losses.py
src/bicbioseg/utils/metrics.py
src/bicbioseg/utils/preprocessing.py
src/bicbioseg/utils/progress.py
src/bicbioseg/utils/training.py
tests/test_extended_training.py
tests/test_full_models.py
tests/test_imageops.py
tests/test_regressions.py
tests/test_segmenter.py
tests/test_training_contracts.py
tests/test_transformer_models.py
tests/test_workflow_improvements.py