Metadata-Version: 2.0
Name: FlowCal
Version: 1.1.0
Summary: Flow Cytometry Calibration Library
Home-page: https://github.com/taborlab/FlowCal
Author: Sebastian Castillo-Hair
Author-email: castillohair@gmail.com
License: MIT
Keywords: flow cytometry
Platform: UNKNOWN
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 2.7
Requires-Dist: XlsxWriter (>=0.5.2)
Requires-Dist: matplotlib (>=1.3.1)
Requires-Dist: numpy (>=1.8.2)
Requires-Dist: palettable (>=2.1.1)
Requires-Dist: pandas (>=0.16.1)
Requires-Dist: scikit-learn (>=0.16.0)
Requires-Dist: scipy (>=0.14.0)
Requires-Dist: xlrd (>=0.9.2)

===========
``FlowCal``
===========
``FlowCal`` is a library for processing and analyzing flow cytometry data in Python.
It features:

* Extraction of Flow Cytometry Standard (FCS) files into numpy array-like structures
* Traditional and non-standard gating, including automatic density-based two-dimensional gating.
* Traditional transformation functions, such as exponentiation.
* Analysis of calibration beads data, standard curve generation, and transformation to absolute units (Molecules of Equivalent Fluorophore, MEF).
* Plotting, including generation of histograms, density plots and scatter plots.
* A user-fiendly Excel UI to gate, transform, plot, and generate statistics from a list of flow cytometry samples in a simple fashion.

Documentation
=============
The official documentation can be found in http://taborlab.github.io/FlowCal/. Here you will find installation instructions, tutorials, and more.

Report Bugs
===========
The official way to report a bug is through the issue tracker on github (https://github.com/taborlab/FlowCal/issues). Try to be as explicit as possible when describing your issue. Ideally, a set of instructions to reproduce the error should be provided, together with the version of all the relevant packages you are using.

Request Features
================
Features can also be requested through the issue tracker on github. Try to be as descriptive as possible about the desired feature.

