# Python
__pycache__/
*.py[cod]
*$py.class
*.egg-info/
.eggs/
build/
dist/
.eggs/

# Virtual environments
.venv/
venv/
env/

# Testing / coverage
.pytest_cache/
.coverage
htmlcov/
.mypy_cache/
.ruff_cache/
.tox/

# Jupyter
.ipynb_checkpoints/

# OS
.DS_Store
Thumbs.db

# IDE
.vscode/
.idea/

# Data / medical images (never commit patient data)
*.dcm
*.nii
*.nii.gz
data/
*.env

# Experiment tracking
mlruns/
wandb/
outputs/
lightning_logs/

# Generated by running the examples/ scripts
examples/output/

# graphify (regenerate with `graphify update .`)
graphify-out/

# Claude Code project instructions -- kept local, not part of the
# published repo (see CHANGELOG.md's Unreleased entry for context)
CLAUDE.md
