setup.py
bio_assembly_refinement/__init__.py
bio_assembly_refinement/circularisation.py
bio_assembly_refinement/contig_break_finder.py
bio_assembly_refinement/contig_cleanup.py
bio_assembly_refinement/contig_history.py
bio_assembly_refinement/main.py
bio_assembly_refinement/reassembly.py
bio_assembly_refinement/utils.py
bio_assembly_refinement.egg-info/PKG-INFO
bio_assembly_refinement.egg-info/SOURCES.txt
bio_assembly_refinement.egg-info/dependency_links.txt
bio_assembly_refinement.egg-info/requires.txt
bio_assembly_refinement.egg-info/top_level.txt
scripts/contig_break_finder
scripts/pacbio_post_process