BLASTP 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= HBB1_XENLA
         (145 letters)

Database: data/sp_hbb1
           24 sequences; 4549 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

HBB1_XENLA Hemoglobin beta-1 chain (Major).                           303   2e-86
HBB1_XENBO Hemoglobin beta-1 chain (Major).                           295   4e-84
HBB1_XENTR Hemoglobin beta-1 chain.                                   237   1e-66
HBB1_IGUIG Hemoglobin beta-1 chain.                                   152   7e-41
HBB1_VAREX Hemoglobin beta-I chain.                                   150   2e-40
HBB1_TRICR Hemoglobin beta-1 chain (Major).                           147   1e-39
HBB1_RAT Hemoglobin beta chain, major-form.                           145   4e-39
HBB1_MOUSE Hemoglobin beta-1 chain (B1) (Major).                      143   3e-38
HBB1_SPHPU Hemoglobin beta-1 chain.                                   142   4e-38
HBB1_TAPTE Hemoglobin beta-1 chain (Major).                           137   2e-36
HBB0_PAGBO Hemoglobin beta-0 chain (HB 0).                            133   3e-35
HBB1_ANAMI Hemoglobin beta-1 chain.                                   131   1e-34
HBB1_PAGBO Hemoglobin beta-1 chain (HB 1).                            131   1e-34
HBB1_CYGMA Hemoglobin beta-1 chain.                                   129   4e-34
HBB1_ONCMY Hemoglobin beta-I chain.                                   124   2e-32
HBB1_UROHA Hemoglobin beta-1 chain (Fragments).                       114   1e-29
HBB1_TORMA Hemoglobin beta-1 chain.                                    84   1e-20
MYG_GALCR Myoglobin.                                                   52   8e-11
MYG_ERIEU Myoglobin.                                                   52   9e-11
MYG_DIDMA Myoglobin.                                                   50   4e-10
MYG_ESCGI Myoglobin.                                                   41   2e-07
MYG_ELEMA Myoglobin.                                                   39   1e-06

>HBB1_XENLA Hemoglobin beta-1 chain (Major).
          Length = 145

 Score =  303 bits (775), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 145/145 (100%), Positives = 145/145 (100%)

Query: 1   GLTAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVA 60
           GLTAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVA
Sbjct: 1   GLTAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVA 60

Query: 61  AHGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEE 120
           AHGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEE
Sbjct: 61  AHGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEE 120

Query: 121 YTPELHAAYEHLFDAIADALGKGYH 145
           YTPELHAAYEHLFDAIADALGKGYH
Sbjct: 121 YTPELHAAYEHLFDAIADALGKGYH 145


>HBB1_XENBO Hemoglobin beta-1 chain (Major).
          Length = 145

 Score =  295 bits (755), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 140/145 (96%), Positives = 143/145 (98%)

Query: 1   GLTAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVA 60
           GLTAHDRQLINSTWGK+CAKTIG+EALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVA
Sbjct: 1   GLTAHDRQLINSTWGKVCAKTIGKEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVA 60

Query: 61  AHGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEE 120
           AHGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDP NFKRFGGCLSI+LAR FHEE
Sbjct: 61  AHGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPCNFKRFGGCLSISLARQFHEE 120

Query: 121 YTPELHAAYEHLFDAIADALGKGYH 145
           YTPELHAAYEHLFDAIADALGKGYH
Sbjct: 121 YTPELHAAYEHLFDAIADALGKGYH 145


>HBB1_XENTR Hemoglobin beta-1 chain.
          Length = 146

 Score =  237 bits (605), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 108/144 (75%), Positives = 125/144 (86%)

Query: 2   LTAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAA 61
           LTA +RQLI  TW K+CAKT+G++ALG +L+TYPWTQRYFSSFGNL+S +A+FHN AVA 
Sbjct: 3   LTAKERQLITGTWSKICAKTLGKQALGSMLYTYPWTQRYFSSFGNLSSIEAIFHNAAVAT 62

Query: 62  HGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEY 121
           HGEKV+TSIGEAIKHMDDIKGYYAQLSKYHSETLHVDP NFKRF  C  I++A+   E++
Sbjct: 63  HGEKVLTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPYNFKRFCSCTIISMAQTLQEDF 122

Query: 122 TPELHAAYEHLFDAIADALGKGYH 145
           TPEL AA+E LF AIADALGKGYH
Sbjct: 123 TPELQAAFEKLFAAIADALGKGYH 146


>HBB1_IGUIG Hemoglobin beta-1 chain.
          Length = 146

 Score =  152 bits (383), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 70/143 (48%), Positives = 98/143 (68%)

Query: 3   TAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAAH 62
           TA ++QLI   WGK+    IG E L  LL  YPWTQR+F  FGNL++A A+  N  V AH
Sbjct: 4   TAEEKQLITQVWGKIDVAQIGGETLACLLVVYPWTQRFFPDFGNLSNAAAICGNAKVKAH 63

Query: 63  GEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEYT 122
           G+KV+TS G+A+K++D+IK  +A+LS+ H + LHVDP+NF+  G  +   LA HF +++T
Sbjct: 64  GKKVLTSFGDAVKNLDNIKDTFAKLSELHCDKLHVDPVNFRLLGNVMITRLAAHFGKDFT 123

Query: 123 PELHAAYEHLFDAIADALGKGYH 145
           P  HAA++ L  A+A AL + YH
Sbjct: 124 PACHAAFQKLTGAVAHALARRYH 146


>HBB1_VAREX Hemoglobin beta-I chain.
          Length = 146

 Score =  150 bits (379), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 74/143 (51%), Positives = 97/143 (67%)

Query: 3   TAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAAH 62
           TA ++QLI S WGK+    IG E L  LL  YPWTQR FS FGNL+S  A+  N  V AH
Sbjct: 4   TAEEKQLICSLWGKIDVGLIGGETLAGLLVIYPWTQRQFSHFGNLSSPTAIAGNPRVKAH 63

Query: 63  GEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEYT 122
           G+KV+TS G+AIK++D+IK  +A+LS+ H + LHVDP NFK  G  L I LA H  +E+T
Sbjct: 64  GKKVLTSFGDAIKNLDNIKDTFAKLSELHCDKLHVDPTNFKLLGNVLVIVLADHHGKEFT 123

Query: 123 PELHAAYEHLFDAIADALGKGYH 145
           P  HAAY+ L + ++ +L + YH
Sbjct: 124 PAHHAAYQKLVNVVSHSLARRYH 146


>HBB1_TRICR Hemoglobin beta-1 chain (Major).
          Length = 145

 Score =  147 bits (372), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 71/144 (49%), Positives = 93/144 (64%)

Query: 2   LTAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAA 61
            T  + Q I+   GK+    +G EALGRL+   PWT+RYF SFG+L+SA+A+ HN  VA+
Sbjct: 2   FTNDESQHIHDVCGKIPVDQVGAEALGRLILVNPWTRRYFKSFGDLSSAEAIQHNPKVAS 61

Query: 62  HGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEY 121
           HG KV+ SI EA+KH+DD+K YYA LS  H + L+VDP NFK FGG +SI    H   +Y
Sbjct: 62  HGAKVMHSIAEAVKHLDDLKAYYADLSTIHCKKLYVDPANFKLFGGIVSIVTGMHLGTDY 121

Query: 122 TPELHAAYEHLFDAIADALGKGYH 145
           T +  AA+E     +  AL  GYH
Sbjct: 122 TAQKQAAFEKFLHHVEAALATGYH 145


>HBB1_RAT Hemoglobin beta chain, major-form.
          Length = 146

 Score =  145 bits (367), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 93/144 (64%)

Query: 2   LTAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAA 61
           LT  ++  +N  WGK+    +G EALGRLL  YPWTQRYF SFG+L+SA A+  N  V A
Sbjct: 3   LTDAEKAAVNGLWGKVNPDDVGGEALGRLLVVYPWTQRYFDSFGDLSSASAIMGNPKVKA 62

Query: 62  HGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEY 121
           HG+KV+ +  + +KH+D++KG +A LS+ H + LHVDP NF+  G  + I L  H  +E+
Sbjct: 63  HGKKVINAFNDGLKHLDNLKGTFAHLSELHCDKLHVDPENFRLLGNMIVIVLGHHLGKEF 122

Query: 122 TPELHAAYEHLFDAIADALGKGYH 145
           TP   AA++ +   +A AL   YH
Sbjct: 123 TPCAQAAFQKVVAGVASALAHKYH 146


>HBB1_MOUSE Hemoglobin beta-1 chain (B1) (Major).
          Length = 146

 Score =  143 bits (360), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 93/144 (64%)

Query: 2   LTAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAA 61
           LT  ++  ++  WGK+ +  +G EALGRLL  YPWTQRYF SFG+L+SA A+  N  V A
Sbjct: 3   LTDAEKAAVSCLWGKVNSDEVGGEALGRLLVVYPWTQRYFDSFGDLSSASAIMGNAKVKA 62

Query: 62  HGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEY 121
           HG+KV+T+  + + H+D +KG +A LS+ H + LHVDP NF+  G  + I L  H  +++
Sbjct: 63  HGKKVITAFNDGLNHLDSLKGTFASLSELHCDKLHVDPENFRLLGNMIVIVLGHHLGKDF 122

Query: 122 TPELHAAYEHLFDAIADALGKGYH 145
           TP   AA++ +   +A AL   YH
Sbjct: 123 TPAAQAAFQKVVAGVATALAHKYH 146


>HBB1_SPHPU Hemoglobin beta-1 chain.
          Length = 146

 Score =  142 bits (359), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 93/143 (65%)

Query: 3   TAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAAH 62
           TA ++ L+ S W K+    IG EALGRLL  YPWTQR+F+ FGNL+SA A+  N  V AH
Sbjct: 4   TAEEKHLLGSLWAKVDVADIGGEALGRLLVVYPWTQRFFADFGNLSSATAICGNPRVKAH 63

Query: 63  GEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEYT 122
           G+KV T  GEA+KH+D++K  +A LS+ H + LHVD  NFK  G  + + LA   H+ +T
Sbjct: 64  GKKVFTMFGEALKHLDNLKETFASLSELHCDKLHVDTENFKLLGNLVIVVLAARLHDSFT 123

Query: 123 PELHAAYEHLFDAIADALGKGYH 145
           P   AA+  L  ++A AL + YH
Sbjct: 124 PAAQAAFHKLAYSVAHALARRYH 146


>HBB1_TAPTE Hemoglobin beta-1 chain (Major).
          Length = 146

 Score =  137 bits (344), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 68/144 (47%), Positives = 96/144 (66%)

Query: 2   LTAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAA 61
           LT  ++  + + W K+    +G EALGRLL  YPWTQR+F SFG+L++A AV  N  V A
Sbjct: 3   LTGEEKAAVLALWDKVDEDKVGGEALGRLLVVYPWTQRFFDSFGDLSTAAAVMGNPKVKA 62

Query: 62  HGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEY 121
           HG+KV+ S G+ + H+DD+K  +AQLS+ H + LHVDP NF+  G  L + LA+ F + +
Sbjct: 63  HGKKVLHSFGDGVHHLDDLKVTFAQLSELHCDKLHVDPENFRLLGNVLVVVLAQQFGKAF 122

Query: 122 TPELHAAYEHLFDAIADALGKGYH 145
           TPEL AAY+ +   +A+AL   YH
Sbjct: 123 TPELQAAYQKVVAGVANALAHKYH 146


>HBB0_PAGBO Hemoglobin beta-0 chain (HB 0).
          Length = 146

 Score =  133 bits (334), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 84/143 (58%)

Query: 3   TAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAAH 62
           T  +R  I   + KL    +G   L R L  YPWTQRYF+ FGNL +A A+  N  V+ H
Sbjct: 4   TDFERATIKDIFSKLEYDVVGPATLARCLVVYPWTQRYFAKFGNLYTATAIAENAMVSKH 63

Query: 63  GEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEYT 122
           G  ++  +  A+K+MDDIK  YA+LS  HSE LHVDP NFK    CL+I +A  F   +T
Sbjct: 64  GITILHGLDRAVKNMDDIKNTYAELSVLHSEKLHVDPDNFKLLADCLTIVVAARFGSAFT 123

Query: 123 PELHAAYEHLFDAIADALGKGYH 145
            E+ AA+E     +  +LG+ YH
Sbjct: 124 GEVQAAFEKFMAVVVSSLGRQYH 146


>HBB1_ANAMI Hemoglobin beta-1 chain.
          Length = 146

 Score =  131 bits (329), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 85/139 (61%)

Query: 6   DRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAAHGEK 65
           +R +I S +  L  + IG +AL R L  YPWTQRYF SFGNL++  A+  N  +AAHG K
Sbjct: 7   ERAVIISIFAGLDYEDIGPKALSRCLIVYPWTQRYFGSFGNLSTPAAIMGNPKIAAHGIK 66

Query: 66  VVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEYTPEL 125
           V+  +   +K+MD+IK  Y +LS  HSETLHVDP NFK    CL+I +A      +TP+ 
Sbjct: 67  VLHGLDRGVKNMDNIKDAYTELSILHSETLHVDPDNFKLLADCLTIVVAAKMGCAFTPDT 126

Query: 126 HAAYEHLFDAIADALGKGY 144
             A++     +  ALGK Y
Sbjct: 127 QLAFQKFLAVVVSALGKQY 145


>HBB1_PAGBO Hemoglobin beta-1 chain (HB 1).
          Length = 146

 Score =  131 bits (329), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 88/143 (61%)

Query: 3   TAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAAH 62
           T  +R +I+  +  L  + IG +AL R L  YPWTQR+FS FGNL +A+++  N  VAAH
Sbjct: 4   TDKERSIISDIFSHLDYEDIGPKALSRCLIVYPWTQRHFSGFGNLYNAESIIGNANVAAH 63

Query: 63  GEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEYT 122
           G KV+  +   +K+MD+I+  YA LS  HSE LHVDP NFK    C++I LA    + +T
Sbjct: 64  GIKVLHGLDRGLKNMDNIEATYADLSTLHSEKLHVDPDNFKLLADCITIVLAAKMGQAFT 123

Query: 123 PELHAAYEHLFDAIADALGKGYH 145
            E+  A++     +  ALGK YH
Sbjct: 124 AEIQGAFQKFLAVVVSALGKQYH 146


>HBB1_CYGMA Hemoglobin beta-1 chain.
          Length = 146

 Score =  129 bits (324), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 64/137 (46%), Positives = 84/137 (61%)

Query: 9   LINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAAHGEKVVT 68
           +IN  +  L    IG +AL R L  YPWTQR+FS FGNL +A+A+  N  VAAHG KV+ 
Sbjct: 10  IINDIFSHLDYDDIGPKALSRCLIVYPWTQRHFSGFGNLYNAEAIIGNANVAAHGIKVLH 69

Query: 69  SIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEYTPELHAA 128
            +   +K+MD+I   YA+LS  HSE LHVDP NFK    C++I LA    + +T E  AA
Sbjct: 70  GLDRGLKNMDNIVDAYAELSTLHSEKLHVDPDNFKLLSDCITIVLAAKLGKAFTAETQAA 129

Query: 129 YEHLFDAIADALGKGYH 145
           ++     +  ALGK YH
Sbjct: 130 FQKFMAVVVSALGKQYH 146


>HBB1_ONCMY Hemoglobin beta-I chain.
          Length = 146

 Score =  124 bits (310), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 84/142 (59%)

Query: 3   TAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAAH 62
           T  ++  I++ WGK+    IG  AL R+L  YPWTQRYF SFGN+++  A+  N  VAAH
Sbjct: 4   TDAEKSTISAVWGKVNIDEIGPLALARVLIVYPWTQRYFGSFGNVSTPAAIMGNPKVAAH 63

Query: 63  GEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEYT 122
           G+ V  ++ +A+K+M +I   Y  LS+ H+  L VDP NF+     L+I +A  F   +T
Sbjct: 64  GKVVCGALDKAVKNMGNILATYKSLSETHANKLFVDPDNFRVLADVLTIVIAAKFGASFT 123

Query: 123 PELHAAYEHLFDAIADALGKGY 144
           PE+ A ++     +  A+G  Y
Sbjct: 124 PEIQATWQKFMKVVVAAMGSRY 145


>HBB1_UROHA Hemoglobin beta-1 chain (Fragments).
          Length = 146

 Score =  114 bits (285), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 80/143 (55%)

Query: 3   TAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAAH 62
           TA ++ LIN+ WGK+   ++G E L  LL  YPWTQR+F  FGNL++  A+ +N      
Sbjct: 4   TAEEKALINAYWGKVDVGSVGGETLANLLVVYPWTQRFFEDFGNLSTPSAILNNPKXXXX 63

Query: 63  GEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHEEYT 122
              V+TS G+A+K++D++     +LS+YH   LHVDP+NF+  G  L    A +F +   
Sbjct: 64  XXXVITSFGDALKNLDNVXXXXXKLSEYHCNKLHVDPVNFRLLGDVLITLSAANFGKXXX 123

Query: 123 PELHAAYEHLFDAIADALGKGYH 145
                    L   +A AL + YH
Sbjct: 124 XXXXXXXXXLVGVVAHALARRYH 146


>HBB1_TORMA Hemoglobin beta-1 chain.
          Length = 142

 Score = 84.3 bits (207), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 6/146 (4%)

Query: 1   GLTAHDRQLINSTWGKLCAKTIGQEALGRLLWTYPWTQRYFSSFG-NLNSADAVFHNEAV 59
            LT  + +LI   W  +    I  +AL R+ + YPWT R F+SF  N  ++D   H+ AV
Sbjct: 2   SLTDEEIRLIQHIWSNVNVVEITAKALERVFYVYPWTTRLFTSFNHNFKASDKQVHDHAV 61

Query: 60  AAHGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRFGGCLSIALARHFHE 119
                 V  +I  AI  + DI   ++ LS  H + L VD  NF   G    + LA    +
Sbjct: 62  -----NVSNAISAAIGDLHDINKNFSALSTKHQKKLGVDTSNFMLLGQAFLVELAALEKD 116

Query: 120 EYTPELHAAYEHLFDAIADALGKGYH 145
           ++TP+ H A   LF+ + +AL   YH
Sbjct: 117 KFTPQYHKAALKLFEVVTEALSCQYH 142


>MYG_GALCR Myoglobin.
          Length = 153

 Score = 52.4 bits (124), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 1   GLTAHDRQLINSTWGKLCAKTIG--QEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEA 58
           GL+  + QL+   WGK+ A   G  Q+ L RL   +P T   F  F NL +AD +  +E 
Sbjct: 1   GLSDGEWQLVLKIWGKVEADLAGHGQDVLIRLFTAHPETLEKFDKFKNLKTADEMKASED 60

Query: 59  VAAHGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRF 105
           +  HG  V+T++G  +K     +     L++ H+ T H  P+ +  F
Sbjct: 61  LKKHGVTVLTALGGILKKKGQHEAEIKPLAQSHA-TKHKIPVKYLEF 106


>MYG_ERIEU Myoglobin.
          Length = 153

 Score = 52.0 bits (123), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 1   GLTAHDRQLINSTWGKLCAKTIG--QEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEA 58
           GL+  + QL+ + WGK+ A   G  QE L RL   +P T   F  F +L S D +  +E 
Sbjct: 1   GLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKDHPETLEKFDKFKHLKSEDEMKSSED 60

Query: 59  VAAHGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRF 105
           +  HG  V+T++G  +K     +   A L++ H+   H  P+ +  F
Sbjct: 61  LKKHGTTVLTALGGILKKKGQHEAQLAPLAQSHANK-HKIPVKYLEF 106


>MYG_DIDMA Myoglobin.
          Length = 153

 Score = 49.7 bits (117), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 1   GLTAHDRQLINSTWGKLCAKTIG--QEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEA 58
           GL+  + QL+ + WGK+ A   G  QE L RL   +P T   F  F +L S D +  +E 
Sbjct: 1   GLSDGEWQLVLNAWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASED 60

Query: 59  VAAHGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRF 105
           +  HG  V+T++G  +K   + +     L++ H+ T H   + F  F
Sbjct: 61  LKKHGATVLTALGNILKKKGNHEAELKPLAQSHA-TKHKISVQFLEF 106


>MYG_ESCGI Myoglobin.
          Length = 153

 Score = 40.8 bits (94), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 3/100 (3%)

Query: 8   QLINSTWGKLCAKTIG--QEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEAVAAHGEK 65
           QL+ + W K+ A   G  Q+ L RL   +P T   F  F +L +   +  +E +  HG  
Sbjct: 8   QLVLNIWAKVEADVAGHGQDILIRLFKGHPETLEKFDKFKHLKTEAEMKASEDLKKHGNT 67

Query: 66  VVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRF 105
           V+T++G  +K     +     L++ H+ T H  P+ +  F
Sbjct: 68  VLTALGGILKKKGHHEAELKPLAQSHA-TKHKIPIKYLEF 106


>MYG_ELEMA Myoglobin.
          Length = 153

 Score = 38.5 bits (88), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 3/107 (2%)

Query: 1   GLTAHDRQLINSTWGKLCAKTI--GQEALGRLLWTYPWTQRYFSSFGNLNSADAVFHNEA 58
           GL+  + +L+  TWGK+ A     G+    RL   +P T   F  F +L +   +  +E 
Sbjct: 1   GLSDGEWELVLKTWGKVEADIPGHGETVFVRLFTGHPETLEKFDKFKHLKTEGEMKASED 60

Query: 59  VAAHGEKVVTSIGEAIKHMDDIKGYYAQLSKYHSETLHVDPLNFKRF 105
           +   G  V+T++G  +K     +     L++ H+ T H  P+ +  F
Sbjct: 61  LKKQGVTVLTALGGILKKKGHHEAEIQPLAQSHA-TKHKIPIKYLEF 106


  Database: data/sp_hbb1
    Posted date:  Mar 4, 2009 12:10 PM
  Number of letters in database: 4549
  Number of sequences in database:  24
  
Lambda     K      H
   0.321    0.135    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24
Number of Hits to DB: 2640
Number of extensions: 110
Number of successful extensions: 23
Number of sequences better than 1.0e-03: 22
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 22
Length of query: 145
Length of database: 4549
Length adjustment: 38
Effective length of query: 107
Effective length of database: 3637
Effective search space:   389159
Effective search space used:   389159
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
