Metadata-Version: 2.1
Name: singularity-pipeline
Version: 0.2.1
Summary: A runner script for pipelines using Singularity containers
Home-page: https://github.com/kav2k/singularity-pipeline/
Author: Alexander Kashev
Author-email: alexander.kashev@math.unibe.ch
License: MIT
Keywords: singularity container runner
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Programming Language :: Python :: 2
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: POSIX :: Linux
Description-Content-Type: text/markdown
Requires-Dist: PyYAML (>=3.12)
Requires-Dist: argparse (>=1.4.0)
Requires-Dist: colorama (>=0.3)

singularity-pipeline
===

Description
---

`singularity-pipeline` is a Python-based tool for describing, building and running Singularity container-based pipelines.

This tool has been built as part of the Pipeline Interoperability initiative of the [EnhanceR project](https://www.enhancer.ch/).

Source: [https://github.com/kav2k/singularity-pipeline/](https://github.com/kav2k/singularity-pipeline/)

PyPi: [https://pypi.python.org/pypi/singularity-pipeline/](https://pypi.python.org/pypi/singularity-pipeline/)

Note that the script is still rough around the edges.

Installing
---

```bash
pip install singularity-pipeline
```

Running
---

See usage instructions with

```bash
singularity-pipeline help
```


