AUTHORS.rst
CHANGELOG.md
CONTRIBUTING.rst
LICENSE
MANIFEST.in
README.rst
setup.cfg
setup.py
anonapi/__init__.py
anonapi/batch.py
anonapi/client.py
anonapi/context.py
anonapi/decorators.py
anonapi/exceptions.py
anonapi/inputfile.py
anonapi/logging.py
anonapi/mapper.py
anonapi/objects.py
anonapi/parameters.py
anonapi/paths.py
anonapi/persistence.py
anonapi/responses.py
anonapi/selection.py
anonapi/settings.py
anonapi/testresources.py
anonapi.egg-info/PKG-INFO
anonapi.egg-info/SOURCES.txt
anonapi.egg-info/dependency_links.txt
anonapi.egg-info/entry_points.txt
anonapi.egg-info/not-zip-safe
anonapi.egg-info/requires.txt
anonapi.egg-info/top_level.txt
anonapi/cli/__init__.py
anonapi/cli/batch_commands.py
anonapi/cli/click_parameter_types.py
anonapi/cli/click_parameters.py
anonapi/cli/create_commands.py
anonapi/cli/entrypoint.py
anonapi/cli/job_commands.py
anonapi/cli/map_commands.py
anonapi/cli/select_commands.py
anonapi/cli/server_commands.py
anonapi/cli/settings_commands.py
anonapi/cli/user_commands.py
docs/generator/templates/command_reference_base.rst
docs/generator/templates/concepts_base.rst
docs/sphinx/Makefile
docs/sphinx/authors.rst
docs/sphinx/command_reference.rst
docs/sphinx/concepts.rst
docs/sphinx/conf.py
docs/sphinx/configuration.rst
docs/sphinx/contributing.rst
docs/sphinx/index.rst
docs/sphinx/installation.rst
docs/sphinx/make.bat
docs/sphinx/modules.rst
docs/sphinx/python_usage.rst
docs/sphinx/quickstart.rst
docs/sphinx/readme.rst
docs/sphinx/troubleshooting.rst
docs/sphinx/usage.rst
docs/sphinx/static/screenshot.jpg
tests/__init__.py
tests/conftest.py
tests/factories.py
tests/mock_responses.py
tests/test_batch.py
tests/test_cli.py
tests/test_cli_click_types.py
tests/test_cli_create.py
tests/test_cli_map.py
tests/test_cli_parameters.py
tests/test_cli_select.py
tests/test_cli_settings.py
tests/test_client.py
tests/test_inputfile.py
tests/test_logging.py
tests/test_mapper.py
tests/test_parameters.py
tests/test_paths.py
tests/test_responses.py
tests/test_selection.py
tests/test_settings.py
tests/test_testresources.py
tests/resources/test_cli/anon_mapping.csv
tests/resources/test_cli/anon_mapping_diverse.csv
tests/resources/test_cli/selection/fileselection.txt
tests/resources/test_cli/test_dir/.fileselection.txt.kate-swp
tests/resources/test_cli/test_dir/somedoc.odt
tests/resources/test_cli/test_dir/1-SR-9001/1
tests/resources/test_cli/test_dir/2.0-CT-1/1
tests/resources/test_cli/test_dir/2.0-CT-1/2
tests/resources/test_cli/test_dir/AiCE_3.000_CE-CT-6/.directory
tests/resources/test_cli/test_dir/AiCE_3.000_CE-CT-6/some_non_dicom_file.txt
tests/resources/test_cli_click_types/corruptfileselection.txt
tests/resources/test_cli_click_types/fileselection.txt
tests/resources/test_cli_click_types/some_folder_names.xlsx
tests/resources/test_cli_create/trailing_space_in_mapping.csv
tests/resources/test_cli_parameters/folder1A/subfolderA/test1
tests/resources/test_cli_parameters/folder1B/subfolderB/test3
tests/resources/test_cli_parameters/folder2C/subfolderC/test2
tests/resources/test_inputfile/example_deid_form.xlsx
tests/resources/test_inputfile/example_deid_form_missing_values.xlsx
tests/resources/test_inputfile/some_folder_names.xlsx
tests/resources/test_inputfile/test_single_line.csv
tests/resources/test_inputfile/formats/test_colon_sep.csv
tests/resources/test_inputfile/formats/test_comma_sep.csv
tests/resources/test_inputfile/formats/test_comma_sep.txt
tests/resources/test_inputfile/formats/test_excel_2007-2013_XML.xlsx
tests/resources/test_mapper/__init__.py
tests/resources/test_mapper/anon_mapping_os_error.csv
tests/resources/test_mapper/example_corrupt_mapping.csv
tests/resources/test_mapper/example_mapping.csv
tests/resources/test_mapper/example_mapping_colon.csv
tests/resources/test_mapper/example_mapping_inputs.py
tests/resources/test_mapper/example_mapping_no_header.csv
tests/resources/test_mapper/example_mapping_random_content.csv
tests/resources/test_mapper/example_pims_only_mapping.csv
tests/resources/test_mapper/example_sniffer_inputs.py
tests/resources/test_mapper/example_unknown_source_key.csv
tests/resources/test_mapper/mapping_missing_column_header.csv
tests/resources/test_mapper/mapping_patient_id_only.csv
tests/resources/test_mapper/mapping_single_column.csv
tests/resources/test_mapper/mapping_with_missing_section.csv
tests/resources/test_mapper/with_mapping_wide_settings.csv
tests/resources/test_mapper/inputfile/some_folder_names.xlsx
tests/resources/test_mapper/mapping_list_folder/with_mapping/anon_mapping.csv
tests/resources/test_selection/test_dir/somedoc.odt
tests/resources/test_selection/test_dir/1-SR-9001/1
tests/resources/test_selection/test_dir/2.0-CT-1/1
tests/resources/test_selection/test_dir/2.0-CT-1/2
tests/resources/test_selection/test_dir/AiCE_3.000_CE-CT-6/.directory
tests/resources/test_selection/test_dir/AiCE_3.000_CE-CT-6/some_non_dicom_file.txt
tests/resources/test_selection/test_dir_different_patientID/somedoc.odt
tests/resources/test_selection/test_dir_different_patientID/1-SR-9001/1
tests/resources/test_selection/test_dir_different_patientID/1-SR-9001/1.bak
tests/resources/test_selection/test_dir_different_patientID/2.0-CT-1/1
tests/resources/test_selection/test_dir_different_patientID/2.0-CT-1/1.bak
tests/resources/test_selection/test_dir_different_patientID/2.0-CT-1/2
tests/resources/test_selection/test_dir_different_patientID/AiCE_3.000_CE-CT-6/.directory
tests/resources/test_selection/test_dir_different_patientID/AiCE_3.000_CE-CT-6/some_non_dicom_file.txt
tests/resources/test_settings/settings.yml
tests/resources/test_settings/settings_old.yml
tests/resources/test_settings/settings_post_1_4_style.yml
tests/resources/test_settings/settings_pre_1_4_alternate.yml
tests/resources/test_settings/settings_wrong.yml
tests/resources/test_settings/settings_wrong_2.yml