capcruncher-tools>=0.1.9
click<=8.2.0
cookiecutter
cooler
duckdb
h5py
ibis-framework[duckdb]
loguru
more-itertools
numpy
pandas<=2.0.1
plotly<=5.17.0,>5.0.0
pyarrow<12.0.0,>8.0.0
pybedtools
pyranges
pysam<=0.19.1,>0.15.0
quarto
ray
seaborn
snakemake<=7.30.2
tqdm
trackhub
tracknado
ujson
xopen
xxhash

[full]
pydeseq2
coolbox

[stats]
pydeseq2

[visualisation]
coolbox
