.gitignore
.pre-commit-config.yaml
CODE_OF_CONDUCT.md
LICENSE.txt
README.md
codecov.yml
pyproject.toml
.github/dependabot.yml
.github/workflows/deploy.yml
.github/workflows/docs.yml
.github/workflows/lint.yml
.github/workflows/test.yml
TopoEmbedX.egg-info/PKG-INFO
TopoEmbedX.egg-info/SOURCES.txt
TopoEmbedX.egg-info/dependency_links.txt
TopoEmbedX.egg-info/requires.txt
TopoEmbedX.egg-info/top_level.txt
docs/Makefile
docs/conf.py
docs/index.rst
docs/notebooks
docs/_static/favicon-48.png
docs/api/classes.rst
docs/api/index.rst
docs/contributing/index.rst
docs/tutorials/index.rst
resources/logo.png
test/test_neighborhood.py
test/test_tutorials.py
test/classes/test_cell2vec.py
test/classes/test_cell_diff2vec.py
test/classes/test_deepcell.py
test/classes/test_higher_order_laplacian_eigenmaps.py
test/classes/test_hoglee.py
test/classes/test_hope.py
topoembedx/__init__.py
topoembedx/_version.py
topoembedx/exceptions.py
topoembedx/neighborhood.py
topoembedx/classes/__init__.py
topoembedx/classes/cell2vec.py
topoembedx/classes/cell_diff2vec.py
topoembedx/classes/deepcell.py
topoembedx/classes/higher_order_laplacian_eigenmaps.py
topoembedx/classes/hoglee.py
topoembedx/classes/hope.py
topoembedx/classes/random_walks.py
tutorials/cell2vec.ipynb
tutorials/deepcell.ipynb