# Boolean network model of the control of flower morphogenesis in Arabidobis thaliana 
# "From Genes to Flower Patterns and Evolution: Dynamic Models of Gene Regulatory Networks"
# A. Chaos, M. Aldana, C. Espinosa-Soto, B. G. P. de Leon, A. G. Arroyo, E. R. Alvarez-Buylla,
# Journal of Plant Growth Regulation, vol. 25, n. 4, 2006, pp. 278-289
# The functions associated to nodes are minimized

#total number of nodes 
.v 15

# labels of nodes and name of corresponding genes
# 1 = AP3
# 2 = UFO
# 3 = FUL
# 4 = FT
# 5 = AP1
# 6 = EMF1
# 7 = LFY
# 8 = AP2
# 9 = WUS
# 10 = AG
# 11 = LUG
# 12 = CLF
# 13 = TFL1
# 14 = PI
# 15 = SEP

.l 1 AP3 
.l 2 UFO 
.l 3 FUL 
.l 4 FT 
.l 5 AP1 
.l 6 EMF1 
.l 7 LFY 
.l 8 AP2 
.l 9 WUS 
.l 10 AG 
.l 11 LUG 
.l 12 CLF 
.l 13 TFL1 
.l 14 PI 
.l 15 SEP 


# As a result of simulation, we get the following 10 single-point attractors:
# 101100110111011 
# 110110110011011 
# 100110110011011 
# 111100110111011 
# 010001000011100 
# 010001001011100 
# 001100110111011 
# 000110110011001 
# 000001000011100 
# 000001001011100 

# 1 = AP3
.n 1 7 1 2 5 7 10 14 15
1-1--11 1
1---111 1
-1-1--- 1

# 2 = UFO
.n 2 1 2
1 1

# 3 = FUL
.n 3 2 5 13
00 1

# 4 = FT
.n 4 1 6
0 1 

# 5 = AP1
.n 5 4 4 7 10 13
--00 1
1-0- 1
-10- 1

# 6 = EMF1
.n 6 1 7
0 1

# 7 = LFY
.n 7 4 3 5 6 13
---0 1
--0- 1

# 8 = AP2
.n 8 1 13
0 1
 
# 9 = WUS
.n 9 3 9 10 15
1-0 1
10- 1

# 10 = AG
.n 10 9 5 7 8 9 10 11 12 13 15
--0----0- 1
-1--1---1 1
-1----0-- 1
-1---0--- 1
01------- 1
-1-1----- 1
-10------ 1

# 11 = LUG
.n 11 0
1

# 12 = CLF
.n 12 0
1

# 13 = TFL1
.n 13 4 5 6 7 8
010- 1 

# 14 = PI
.n 14 6 1 5 7 10 14 15
11--11 1
1--111 1
--11-- 1
1-1--- 1

# 15 = SEP
.n 15 1 7
1 1

.e end of file
 
