AUTHORS
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MANIFEST.in
README.rst
setup.cfg
setup.py
versioneer.py
MDPOW.egg-info/PKG-INFO
MDPOW.egg-info/SOURCES.txt
MDPOW.egg-info/dependency_links.txt
MDPOW.egg-info/requires.txt
MDPOW.egg-info/top_level.txt
MDPOW.egg-info/zip-safe
doc/requirements.txt
doc/examples/TRIAL/energies.txt
doc/examples/TRIAL/pow.txt
doc/examples/TRIAL/FOO/README.txt
doc/examples/TRIAL/FOO/benzene.pdb.png
doc/examples/TRIAL/benzene/README.txt
doc/examples/TRIAL/benzene/benzene.pdb.png
doc/examples/benzene/README.txt
doc/examples/benzene/benzene.pdb.png
doc/logo/pow-1601674_640.png
doc/sphinx/source/INSTALL.txt
doc/sphinx/source/analysis.txt
doc/sphinx/source/equil.txt
doc/sphinx/source/fep.txt
doc/sphinx/source/forcefields.txt
doc/sphinx/source/index.txt
doc/sphinx/source/init.txt
doc/sphinx/source/scripts.txt
doc/sphinx/source/utilities.txt
doc/sphinx/source/_static/mdpow-logo.png
doc/sphinx/source/analysis/dihedral.txt
doc/sphinx/source/analysis/ensemble.txt
doc/sphinx/source/analysis/ensemble_analysis.txt
doc/sphinx/source/analysis/solvation.txt
doc/tmp/benzene/README.txt
doc/tmp/benzene/benzene.pdb.png
mdpow/__init__.py
mdpow/_version.py
mdpow/config.py
mdpow/equil.py
mdpow/fep.py
mdpow/filelock.py
mdpow/forcefields.py
mdpow/log.py
mdpow/restart.py
mdpow/run.py
mdpow/analysis/__init__.py
mdpow/analysis/dihedral.py
mdpow/analysis/ensemble.py
mdpow/analysis/solvation.py
mdpow/templates/NPT_amber.mdp
mdpow/templates/NPT_charmm.mdp
mdpow/templates/NPT_opls.mdp
mdpow/templates/bar_amber.mdp
mdpow/templates/bar_charmm.mdp
mdpow/templates/bar_opls.mdp
mdpow/templates/em_amber.mdp
mdpow/templates/em_charmm.mdp
mdpow/templates/em_opls.mdp
mdpow/templates/runinput.yml
mdpow/templates/system.top
mdpow/templates/system_octwet.top
mdpow/tests/__init__.py
mdpow/tests/tempdir.py
mdpow/tests/test_Gsolv.py
mdpow/tests/test_analysis.py
mdpow/tests/test_analysis_alchemlyb.py
mdpow/tests/test_config.py
mdpow/tests/test_dihedral.py
mdpow/tests/test_ensemble.py
mdpow/tests/test_equilibration_script.py
mdpow/tests/test_fep.py
mdpow/tests/test_fep_analysis.py
mdpow/tests/test_fep_script.py
mdpow/tests/test_filelock.py
mdpow/tests/test_forcefields.py
mdpow/tests/test_run.py
mdpow/tests/test_runinput.py
mdpow/tests/test_solv_shell.py
mdpow/tests/test_solvation.py
mdpow/tests/test_version.py
mdpow/top/1cyclo.gro
mdpow/top/1cyclo_amber.gro
mdpow/top/1cyclo_charmm.gro
mdpow/top/1oct.gro
mdpow/top/1oct_amber.gro
mdpow/top/1oct_charmm.gro
mdpow/top/1octwet.gro
mdpow/top/1octwet_amber.gro
mdpow/top/1octwet_charmm.gro
mdpow/top/atommass.dat
mdpow/top/elements.dat
mdpow/top/ffoplsaa.itp
mdpow/top/residuetypes.dat
mdpow/top/spc216.gro
mdpow/top/tip4p.gro
mdpow/top/tip5p.gro
mdpow/top/vdwradii.dat
mdpow/top/amber99sb.ff/1cyclo.itp
mdpow/top/amber99sb.ff/1oct.itp
mdpow/top/amber99sb.ff/1octwet.itp
mdpow/top/amber99sb.ff/aminoacids.arn
mdpow/top/amber99sb.ff/aminoacids.c.tdb
mdpow/top/amber99sb.ff/aminoacids.hdb
mdpow/top/amber99sb.ff/aminoacids.n.tdb
mdpow/top/amber99sb.ff/aminoacids.r2b
mdpow/top/amber99sb.ff/aminoacids.rtp
mdpow/top/amber99sb.ff/aminoacids.vsd
mdpow/top/amber99sb.ff/atomtypes.atp
mdpow/top/amber99sb.ff/dna.arn
mdpow/top/amber99sb.ff/dna.hdb
mdpow/top/amber99sb.ff/dna.r2b
mdpow/top/amber99sb.ff/dna.rtp
mdpow/top/amber99sb.ff/ffbonded.itp
mdpow/top/amber99sb.ff/ffnonbonded.itp
mdpow/top/amber99sb.ff/forcefield.doc
mdpow/top/amber99sb.ff/forcefield.itp
mdpow/top/amber99sb.ff/gbsa.itp
mdpow/top/amber99sb.ff/ions.itp
mdpow/top/amber99sb.ff/rna.arn
mdpow/top/amber99sb.ff/rna.hdb
mdpow/top/amber99sb.ff/rna.r2b
mdpow/top/amber99sb.ff/rna.rtp
mdpow/top/amber99sb.ff/spc.itp
mdpow/top/amber99sb.ff/spce.itp
mdpow/top/amber99sb.ff/tip3p.itp
mdpow/top/amber99sb.ff/tip4p.itp
mdpow/top/amber99sb.ff/tip4pew.itp
mdpow/top/amber99sb.ff/tip5p.itp
mdpow/top/amber99sb.ff/urea.itp
mdpow/top/amber99sb.ff/watermodels.dat
mdpow/top/charmm36-mar2019.ff/1cyclo.itp
mdpow/top/charmm36-mar2019.ff/1oct.itp
mdpow/top/charmm36-mar2019.ff/1octwet.itp
mdpow/top/charmm36-mar2019.ff/atomtypes.atp
mdpow/top/charmm36-mar2019.ff/cmap.itp
mdpow/top/charmm36-mar2019.ff/ffbonded.itp
mdpow/top/charmm36-mar2019.ff/ffnonbonded.itp
mdpow/top/charmm36-mar2019.ff/forcefield.doc
mdpow/top/charmm36-mar2019.ff/forcefield.itp
mdpow/top/charmm36-mar2019.ff/gb.itp
mdpow/top/charmm36-mar2019.ff/ions.itp
mdpow/top/charmm36-mar2019.ff/merged.arn
mdpow/top/charmm36-mar2019.ff/merged.c.tdb
mdpow/top/charmm36-mar2019.ff/merged.hdb
mdpow/top/charmm36-mar2019.ff/merged.n.tdb
mdpow/top/charmm36-mar2019.ff/merged.r2b
mdpow/top/charmm36-mar2019.ff/merged.rtp
mdpow/top/charmm36-mar2019.ff/merged.vsd
mdpow/top/charmm36-mar2019.ff/nbfix.itp
mdpow/top/charmm36-mar2019.ff/old_c36_cmap.itp
mdpow/top/charmm36-mar2019.ff/spc.itp
mdpow/top/charmm36-mar2019.ff/spce.itp
mdpow/top/charmm36-mar2019.ff/tip3p.itp
mdpow/top/charmm36-mar2019.ff/tip4p.itp
mdpow/top/charmm36-mar2019.ff/tip5p.itp
mdpow/top/charmm36-mar2019.ff/watermodels.dat
mdpow/top/oplsaa.ff/1cyclo.itp
mdpow/top/oplsaa.ff/1oct.itp
mdpow/top/oplsaa.ff/1octnew.itp
mdpow/top/oplsaa.ff/1octwet.itp
mdpow/top/oplsaa.ff/1octwetnew.itp
mdpow/top/oplsaa.ff/1propanol.itp
mdpow/top/oplsaa.ff/aminoacids.c.tdb
mdpow/top/oplsaa.ff/aminoacids.hdb
mdpow/top/oplsaa.ff/aminoacids.n.tdb
mdpow/top/oplsaa.ff/aminoacids.r2b
mdpow/top/oplsaa.ff/aminoacids.rtp
mdpow/top/oplsaa.ff/aminoacids.vsd
mdpow/top/oplsaa.ff/atomname2type.n2t
mdpow/top/oplsaa.ff/atomtypes.atp
mdpow/top/oplsaa.ff/ethanol.itp
mdpow/top/oplsaa.ff/ffbonded.itp
mdpow/top/oplsaa.ff/ffnonbonded.itp
mdpow/top/oplsaa.ff/forcefield.doc
mdpow/top/oplsaa.ff/forcefield.itp
mdpow/top/oplsaa.ff/gbsa.itp
mdpow/top/oplsaa.ff/ions.itp
mdpow/top/oplsaa.ff/ions_opls.itp
mdpow/top/oplsaa.ff/m24.itp
mdpow/top/oplsaa.ff/methanol.itp
mdpow/top/oplsaa.ff/spc.itp
mdpow/top/oplsaa.ff/spce.itp
mdpow/top/oplsaa.ff/tip3p.itp
mdpow/top/oplsaa.ff/tip4p.itp
mdpow/top/oplsaa.ff/tip4pd.itp
mdpow/top/oplsaa.ff/tip5p.itp
mdpow/top/oplsaa.ff/watermodels.dat
scripts/mdpow-cfg2yaml.py
scripts/mdpow-check
scripts/mdpow-equilibrium
scripts/mdpow-fep
scripts/mdpow-get-runinput
scripts/mdpow-pcw
scripts/mdpow-pow
scripts/mdpow-rebuild-fep
scripts/mdpow-rebuild-simulation
scripts/mdpow-solvationenergy