#!/bin/bash
###TTM 2014-08-27 post-mast steps
export MAST_CONTROL=//home/mayeshiba/MAST_2/CONTROL
export MAST_SCRATCH=//home/mayeshiba/MAST_2/SCRATCH
export MAST_ARCHIVE=//home/mayeshiba/MAST_2/ARCHIVE
rm $MAST_SQUID/MAST_workdirs_2.tar.gz
cd $MAST_CHTC
mv back_2.tar.gz $HOME/back_2.tar.gz
cd $HOME
tar -xzvf back_2.tar.gz
rm back_2.tar.gz
sleep 10
$MAST_CHTC/stripsubmitlist_2.py
sleep 2
while read sdir
do 
    echo $sdir
    if [[ $sdir == *"/neb"* ]]
    then 
        echo "NEB detected; switching submission script"
        cp $MAST_CHTC/submit_neb.sh $sdir/submit.sh
    else echo "not neb"
    fi
done < $MAST_CONTROL/submitlist
mast -m submitonly
