LICENSE.md
README.md
setup.cfg
setup.py
ailist/AIList_core.c
ailist/AIList_core.pxd
ailist/AIList_core.pyx
ailist/IntervalArray_core.c
ailist/IntervalArray_core.pxd
ailist/IntervalArray_core.pyx
ailist/Interval_core.c
ailist/Interval_core.pxd
ailist/Interval_core.pyx
ailist/LabeledIntervalArray_core.c
ailist/LabeledIntervalArray_core.pxd
ailist/LabeledIntervalArray_core.pyx
ailist/LabeledInterval_core.c
ailist/LabeledInterval_core.pxd
ailist/LabeledInterval_core.pyx
ailist/__init__.py
ailist/array_query_core.c
ailist/array_query_core.pxd
ailist/array_query_core.pyx
ailist.egg-info/PKG-INFO
ailist.egg-info/SOURCES.txt
ailist.egg-info/dependency_links.txt
ailist.egg-info/not-zip-safe
ailist.egg-info/requires.txt
ailist.egg-info/top_level.txt
ailist/src/aiarray_add.c
ailist/src/aiarray_construct.c
ailist/src/aiarray_coverage.c
ailist/src/aiarray_extract.c
ailist/src/aiarray_filter.c
ailist/src/aiarray_index.c
ailist/src/aiarray_merge.c
ailist/src/aiarray_nhits.c
ailist/src/aiarray_ops.c
ailist/src/aiarray_query.c
ailist/src/aiarray_wps.c
ailist/src/ailist_add.c
ailist/src/ailist_construct.c
ailist/src/ailist_coverage.c
ailist/src/ailist_extract.c
ailist/src/ailist_filter.c
ailist/src/ailist_index.c
ailist/src/ailist_iter.c
ailist/src/ailist_merge.c
ailist/src/ailist_nhits.c
ailist/src/ailist_ops.c
ailist/src/ailist_query.c
ailist/src/ailist_wps.c
ailist/src/array_query_utilities.c
ailist/src/array_query_utilities.h
ailist/src/augmented_interval_array.c
ailist/src/augmented_interval_array.h
ailist/src/augmented_interval_list.c
ailist/src/augmented_interval_list.h
ailist/src/interval.c
ailist/src/interval.h
ailist/src/khash.h
ailist/src/labeled_aiarray_add.c
ailist/src/labeled_aiarray_construct.c
ailist/src/labeled_aiarray_coverage.c
ailist/src/labeled_aiarray_extract.c
ailist/src/labeled_aiarray_filter.c
ailist/src/labeled_aiarray_get.c
ailist/src/labeled_aiarray_has_hit.c
ailist/src/labeled_aiarray_index.c
ailist/src/labeled_aiarray_iter.c
ailist/src/labeled_aiarray_match.c
ailist/src/labeled_aiarray_merge.c
ailist/src/labeled_aiarray_nhits.c
ailist/src/labeled_aiarray_query.c
ailist/src/labeled_aiarray_wps.c
ailist/src/labeled_augmented_array.c
ailist/src/labeled_augmented_array.h
ailist/src/labeled_interval.c
ailist/src/labeled_interval.h
ailist/src/overlap_index.c
ailist/src/overlap_label_index.c
ailist/src/utilities.h
tests/benchmark.py
tests/test_AIList.py
tests/test_IntervalArray.py
tests/test_LabeledIntervalArray.py