MANIFEST.in
README.md
setup.py
autocti/__init__.py
autocti/exc.py
autocti/charge_injection/__init__.py
autocti/charge_injection/ci_data.py
autocti/charge_injection/ci_fit.py
autocti/charge_injection/ci_frame.py
autocti/charge_injection/ci_hyper.py
autocti/charge_injection/ci_pattern.py
autocti/charge_injection/plotters/__init__.py
autocti/charge_injection/plotters/ci_data_plotters.py
autocti/charge_injection/plotters/ci_fit_plotters.py
autocti/charge_injection/plotters/data_plotters.py
autocti/charge_injection/plotters/fit_plotters.py
autocti/data/__init__.py
autocti/data/cti_image.py
autocti/data/mask.py
autocti/data/util.py
autocti/data/plotters/__init__.py
autocti/data/plotters/array_plotters.py
autocti/data/plotters/plotter_util.py
autocti/model/__init__.py
autocti/model/arctic_params.py
autocti/model/arctic_settings.py
autocti/model/pyarctic.py
autocti/pipeline/__init__.py
autocti/pipeline/phase.py
autocti/pipeline/pipeline.py
test/__init__.py
test/fixtures.py
test/integration/__init__.py
test/integration/integration_util.py
test/integration/tests/__init__.py
test/integration/tests/parallel/__init__.py
test/integration/tests/parallel/x1_species_x1_image_include_hyper_phase.py
test/integration/tests/parallel/x1_species_x1_image_no_pool.py
test/integration/tests/parallel/x1_species_x2_images_use_pool.py
test/integration/tests/parallel/x3_species_x1_image_no_pool.py
test/integration/tests/parallel/x3_species_x2_images_use_pool.py
test/integration/tests/parallel_and_serial/__init__.py
test/integration/tests/parallel_and_serial/x1_species_x1_image_include_hyper_phase.py
test/integration/tests/parallel_and_serial/x1_species_x1_image_no_pool.py
test/integration/tests/parallel_and_serial/x1_species_x2_images_use_pool.py
test/integration/tests/parallel_and_serial/x3_species_x1_image_no_pool.py
test/integration/tests/parallel_and_serial/x3_species_x2_images_use_pool.py
test/integration/tests/serial/__init__.py
test/integration/tests/serial/x1_species_x1_image_include_hyper_phase.py
test/integration/tests/serial/x1_species_x1_image_no_pool.py
test/integration/tests/serial/x1_species_x2_images_use_pool.py
test/integration/tests/serial/x3_species_x1_image_no_pool.py
test/integration/tests/serial/x3_species_x2_images_use_pool.py
test/simulation/__init__.py
test/simulation/data_maker.py
test/simulation/makers.py
test/simulation/simulation_util.py
test/unit/__init__.py
test/unit/charge_injection/__init__.py
test/unit/charge_injection/test_ci_data.py
test/unit/charge_injection/test_ci_fit.py
test/unit/charge_injection/test_ci_frame.py
test/unit/charge_injection/test_ci_hyper.py
test/unit/charge_injection/test_ci_pattern.py
test/unit/charge_injection/plotters/__init__.py
test/unit/charge_injection/plotters/test_ci_data_plotters.py
test/unit/charge_injection/plotters/test_ci_fit_plotters.py
test/unit/charge_injection/plotters/test_data_plotters.py
test/unit/charge_injection/plotters/test_fit_plotters.py
test/unit/data/__init__.py
test/unit/data/test_add_correct_cti_to_image.py
test/unit/data/test_cti_image.py
test/unit/data/test_mask.py
test/unit/data/test_util.py
test/unit/mock/__init__.py
test/unit/mock/mock.py
test/unit/model/__init__.py
test/unit/model/test_arctic_params.py
test/unit/model/test_arctic_settings.py
test/unit/model/test_pyarctic.py
test/unit/pipeline/__init__.py
test/unit/pipeline/test_phase.py
test/unit/pipeline/test_pipeline.py
workspace/__init__.py
workspace/pipelines/__init__.py
workspace/pipelines/parallel_x1_species.py
workspace/pipelines/parallel_x2_species.py
workspace/pipelines/parallel_x3_species.py
workspace/pipelines/serial_x1_species.py
workspace/pipelines/serial_x2_species.py
workspace/pipelines/serial_x3_species.py
workspace/scripts/__init__.py
workspace/scripts/cosmic_rays/__init__.py
workspace/scripts/cosmic_rays/cosmics.py
workspace/scripts/cosmic_rays/fitslib.py
workspace/scripts/requirements/__init__.py
workspace/scripts/requirements/parallel_converter.py
workspace/scripts/requirements/parallel_converter_plot.py
workspace/scripts/requirements/parallel_requirements.py
workspace/scripts/requirements/requirement_converter.py
workspace/scripts/requirements/requirements.py
workspace/scripts/requirements/serial_converter_fix_plot.py
workspace/scripts/requirements/serial_normal_converter.py
workspace/scripts/requirements/serial_normal_converter_plot.py
workspace/scripts/requirements/serial_normal_requirements.py
workspace/scripts/requirements/serial_tight_converter.py
workspace/scripts/requirements/serial_tight_requirements.py
workspace/scripts/requirements/serial_x2_to_x3.py
workspace/tools/__init__.py
workspace/tools/data_makers/__init__.py
workspace/tools/data_makers/parallel_image.py
workspace/tools/data_makers/charge_injection/__init__.py
workspace/tools/data_makers/charge_injection/ci_non_uniform/__init__.py
workspace/tools/data_makers/charge_injection/ci_non_uniform/ci_parallel_non_uniform.py
workspace/tools/data_makers/charge_injection/ci_non_uniform/ci_serial_non_uniform.py
workspace/tools/data_makers/charge_injection/ci_non_uniform_cosmic_rays/__init__.py
workspace/tools/data_makers/charge_injection/ci_non_uniform_cosmic_rays/ci_non_uniform_cosmic_rays_parallel.py
workspace/tools/data_makers/charge_injection/ci_uniform/__init__.py
workspace/tools/data_makers/charge_injection/ci_uniform/ci_parallel_uniform.py
workspace/tools/data_makers/charge_injection/ci_uniform/ci_serial_uniform.py
workspace_jam/__init__.py
workspace_jam/pipelines/__init__.py
workspace_jam/pipelines/parallel_x1_species.py
workspace_jam/pipelines/parallel_x2_species.py
workspace_jam/pipelines/parallel_x3_species.py
workspace_jam/pipelines/serial_x1_species.py
workspace_jam/pipelines/serial_x2_species.py
workspace_jam/pipelines/serial_x2_species_fix_1.py
workspace_jam/pipelines/serial_x2_species_fix_2.py
workspace_jam/pipelines/serial_x2_species_fix_3.py
workspace_jam/pipelines/serial_x2_species_fix_4.py
workspace_jam/pipelines/serial_x3_species.py
workspace_jam/pipelines/serial_x3_species_fix.py
workspace_jam/pipelines/serial_x3_species_fix_2.py
workspace_jam/pipelines/serial_x3_species_fix_3.py
workspace_jam/pipelines/serial_x3_species_fix_4.py
workspace_jam/pipelines/serial_x3_species_fix_5.py
workspace_jam/pipelines/serial_x3_species_fix_6.py
workspace_jam/pipelines/serial_x3_species_prior_1.py
workspace_jam/pipelines/serial_x3_species_prior_2.py
workspace_jam/runners/__init__.py
workspace_jam/runners/parallel_runner.py
workspace_jam/runners/serial_runner.py
workspace_jam/runners/cosma/__init__.py
workspace_jam/runners/cosma/parallel_runner_cosma.py
workspace_jam/runners/cosma/parallel_runner_cosma_x3.py
workspace_jam/runners/cosma/serial_runner_cosma.py
workspace_jam/runners/cosma/serial_runner_cosma_prior_1.py
workspace_jam/runners/cosma/serial_runner_cosma_prior_2.py
workspace_jam/runners/cosma/serial_runner_cosma_x2.py
workspace_jam/runners/cosma/serial_runner_cosma_x2_fix_1.py
workspace_jam/runners/cosma/serial_runner_cosma_x2_fix_2.py
workspace_jam/runners/cosma/serial_runner_cosma_x2_fix_3.py
workspace_jam/runners/cosma/serial_runner_cosma_x2_fix_4.py
workspace_jam/runners/cosma/serial_runner_cosma_fix_model_7/__init__.py
workspace_jam/runners/cosma/serial_runner_cosma_fix_model_7/serial_runner_cosma_fix.py
workspace_jam/runners/cosma/serial_runner_cosma_fix_model_7/serial_runner_cosma_fix_2.py
workspace_jam/runners/cosma/serial_runner_cosma_fix_model_7/serial_runner_cosma_fix_3.py
workspace_jam/runners/cosma/serial_runner_cosma_fix_model_7/serial_runner_cosma_fix_4.py
workspace_jam/runners/cosma/serial_runner_cosma_fix_model_7/serial_runner_cosma_fix_5.py
workspace_jam/runners/cosma/serial_runner_cosma_fix_model_7/serial_runner_cosma_fix_6.py
workspace_jam/scripts/__init__.py
workspace_jam/scripts/cosmic_rays/__init__.py
workspace_jam/scripts/cosmic_rays/cosmics.py
workspace_jam/scripts/cosmic_rays/fitslib.py
workspace_jam/scripts/requirements/__init__.py
workspace_jam/scripts/requirements/parallel_converter.py
workspace_jam/scripts/requirements/parallel_converter_plot.py
workspace_jam/scripts/requirements/parallel_requirements.py
workspace_jam/scripts/requirements/requirement_converter.py
workspace_jam/scripts/requirements/requirements.py
workspace_jam/scripts/requirements/serial_converter_fix_plot.py
workspace_jam/scripts/requirements/serial_normal_converter.py
workspace_jam/scripts/requirements/serial_normal_converter_plot.py
workspace_jam/scripts/requirements/serial_normal_requirements.py
workspace_jam/scripts/requirements/serial_tight_converter.py
workspace_jam/scripts/requirements/serial_tight_requirements.py
workspace_jam/scripts/requirements/serial_x2_to_x3.py
workspace_jam/tools/__init__.py
workspace_jam/tools/data_makers/__init__.py
workspace_jam/tools/data_makers/parallel_image.py
workspace_jam/tools/data_makers/charge_injection/__init__.py
workspace_jam/tools/data_makers/charge_injection/ci_non_uniform/__init__.py
workspace_jam/tools/data_makers/charge_injection/ci_non_uniform/ci_parallel.py
workspace_jam/tools/data_makers/charge_injection/ci_non_uniform/ci_serial_new_models.py
workspace_jam/tools/data_makers/charge_injection/ci_non_uniform/ci_serial_non_uniform.py
workspace_jam/tools/data_makers/charge_injection/ci_uniform/__init__.py
workspace_jam/tools/data_makers/charge_injection/ci_uniform/ci_parallel_uniform.py
workspace_jam/tools/data_makers/charge_injection/ci_uniform/ci_serial_uniform.py