Metadata-Version: 2.1
Name: aiv
Version: 0.3.19
Summary: A variant annotation package
Home-page: https://github.com/nesegunes
Author: tardis
Author-email: nesegunes.ce@gmail.com
License: UNKNOWN
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.6
Description-Content-Type: text/markdown
Requires-Dist: myvariant

## Annotation of Identified Variants

Annotation of Identified Variants to Create Reports for Clinicians to Assist Therapeutic Decisions

## Prerequisites

It requires three main modules: pandas, myvariant and reportlab

```
pip install pandas
pip install myvariant
pip install reportlab
```

## Installation

```
pip install aiv
```

## Upgrade

```
pip install aiv --upgrade
```

## Usage

```ruby
import aiv

# Get variant info 
aiv.getvariant('chr1', 69635, 'G', 'C')


# Annotate variants
aiv.annotate_mutations('variant_calls.tsv')
```


