CHANGELOG.md
LICENSE
MANIFEST.in
README.md
pyproject.toml
src/pymdkit/__init__.py
src/pymdkit/_config.py
src/pymdkit/_logging.py
src/pymdkit/pymdkit_main.py
src/pymdkit.egg-info/PKG-INFO
src/pymdkit.egg-info/SOURCES.txt
src/pymdkit.egg-info/dependency_links.txt
src/pymdkit.egg-info/entry_points.txt
src/pymdkit.egg-info/requires.txt
src/pymdkit.egg-info/top_level.txt
src/pymdkit/commands/__init__.py
src/pymdkit/commands/_cifio.py
src/pymdkit/commands/_extxyz.py
src/pymdkit/commands/_fileio.py
src/pymdkit/commands/_geometry.py
src/pymdkit/commands/_gpumd.py
src/pymdkit/commands/_gpumd_final_structure.py
src/pymdkit/commands/_gpumd_msd.py
src/pymdkit/commands/_gpumd_run.py
src/pymdkit/commands/_gpumd_status.py
src/pymdkit/commands/_gpumd_thermo.py
src/pymdkit/commands/_lattice.py
src/pymdkit/commands/_msd_auto.py
src/pymdkit/commands/_msd_conductivity.py
src/pymdkit/commands/_msd_coordinates.py
src/pymdkit/commands/_msd_fit.py
src/pymdkit/commands/_msd_io.py
src/pymdkit/commands/_msd_provenance.py
src/pymdkit/commands/_msd_range.py
src/pymdkit/commands/_msd_thermo.py
src/pymdkit/commands/_msd_uncertainty.py
src/pymdkit/commands/_oxidation.py
src/pymdkit/commands/_parallel.py
src/pymdkit/commands/_precision.py
src/pymdkit/commands/_pred_msd_plan.py
src/pymdkit/commands/_pred_msd_reference.py
src/pymdkit/commands/_reduction.py
src/pymdkit/commands/_submit.py
src/pymdkit/commands/_submit_vasp.py
src/pymdkit/commands/_supercell.py
src/pymdkit/commands/_symmetry.py
src/pymdkit/commands/_vasp_ehull.py
src/pymdkit/commands/_vasp_final_structure.py
src/pymdkit/commands/_vasp_nep.py
src/pymdkit/commands/_vasp_output.py
src/pymdkit/commands/_vaspset.py
src/pymdkit/commands/chemsys_entry.py
src/pymdkit/commands/compute_rmsd.py
src/pymdkit/commands/config.py
src/pymdkit/commands/convert.py
src/pymdkit/commands/dope.py
src/pymdkit/commands/ewald.py
src/pymdkit/commands/gpumd_job.py
src/pymdkit/commands/gpumd_out.py
src/pymdkit/commands/msd.py
src/pymdkit/commands/nep_rmse.py
src/pymdkit/commands/perturb.py
src/pymdkit/commands/pred_msd_time.py
src/pymdkit/commands/rd.py
src/pymdkit/commands/realloc_occ.py
src/pymdkit/commands/submit.py
src/pymdkit/commands/supercell.py
src/pymdkit/commands/trjconv.py
src/pymdkit/commands/vasp_job.py
src/pymdkit/commands/vasp_out.py
tests/test_config_logging.py
tests/test_convert.py
tests/test_ehull.py
tests/test_gpumd_out.py
tests/test_lattice_symmetry.py
tests/test_msd_auto.py
tests/test_msd_fit.py
tests/test_msd_large.py
tests/test_msd_phase3.py
tests/test_msd_range.py
tests/test_msd_uncertainty.py
tests/test_parallel.py
tests/test_pred_msd_time.py
tests/test_progress.py
tests/test_realloc_occ.py
tests/test_rmsd_gpu.py
tests/test_rmsd_max.py
tests/test_rmsd_two_folder.py
tests/test_submit.py
tests/test_v165.py
tests/test_v170_job_infrastructure.py
tests/test_v170_vasp_consolidation.py
tests/test_v172_vasp_writing.py
tests/test_vasp_out.py
tests/test_vaspset.py
tests/data/88-Li2YCl3-63-d1.cif