LICENSE
README.md
setup.py
scdna_replication_tools/__init__.py
scdna_replication_tools/assign_s_to_clones.py
scdna_replication_tools/binarize_rt_profiles.py
scdna_replication_tools/bulk_gc_correction.py
scdna_replication_tools/calculate_twidth.py
scdna_replication_tools/cncluster.py
scdna_replication_tools/compute_ccc_features.py
scdna_replication_tools/compute_consensus_clone_profiles.py
scdna_replication_tools/compute_pseudobulk_rt_profiles.py
scdna_replication_tools/infer_SPF.py
scdna_replication_tools/infer_scRT.py
scdna_replication_tools/normalize_by_cell.py
scdna_replication_tools/normalize_by_clone.py
scdna_replication_tools/pert_model.py
scdna_replication_tools/pert_simulator.py
scdna_replication_tools/plot_pert_output.py
scdna_replication_tools/plot_utils.py
scdna_replication_tools/predict_cycle_phase.py
scdna_replication_tools.egg-info/PKG-INFO
scdna_replication_tools.egg-info/SOURCES.txt
scdna_replication_tools.egg-info/dependency_links.txt
scdna_replication_tools.egg-info/entry_points.txt
scdna_replication_tools.egg-info/requires.txt
scdna_replication_tools.egg-info/top_level.txt