.gitignore
.pre-commit-config.yaml
LICENSE
MANIFEST.in
README.md
environment.yml
requirements.txt
setup.cfg
setup.py
tox.ini
.github/workflows/test_and_deploy.yml
.napari/DESCRIPTION.md
examples/clustered_shapes.h5ad
examples/label_expansion.py
examples/labeling_example.py
examples/measure_with_widget.py
examples/mesh_binary_mask.ipynb
examples/object_classification.ipynb
examples/registered_measurements.py
examples/surface_distance_measurement.ipynb
examples/images/annotation_workflow.png
examples/images/setup_annotation.png
resources/mesh_object.png
resources/object_classification.png
resources/region_props_plugin.png
resources/surface_distance_measurement.gif
src/morphometrics/__init__.py
src/morphometrics/_sample_data.py
src/morphometrics/_version.py
src/morphometrics/napari.yaml
src/morphometrics/types.py
src/morphometrics.egg-info/PKG-INFO
src/morphometrics.egg-info/SOURCES.txt
src/morphometrics.egg-info/dependency_links.txt
src/morphometrics.egg-info/entry_points.txt
src/morphometrics.egg-info/requires.txt
src/morphometrics.egg-info/top_level.txt
src/morphometrics/_gui/__init__.py
src/morphometrics/_gui/_qt/__init__.py
src/morphometrics/_gui/_qt/annotation_widgets.py
src/morphometrics/_gui/_qt/labeling_widgets.py
src/morphometrics/_gui/_qt/measurement_widgets.py
src/morphometrics/_gui/_qt/multiple_viewer_widget.py
src/morphometrics/_gui/_qt/_tests/__init__.py
src/morphometrics/_gui/_qt/_tests/test_annotation_widgets.py
src/morphometrics/_gui/label_curator/__init__.py
src/morphometrics/_gui/label_curator/label_cleaning.py
src/morphometrics/_gui/label_curator/label_curator.py
src/morphometrics/_gui/label_curator/label_painting.py
src/morphometrics/_gui/label_curator/qt_label_curator.py
src/morphometrics/_gui/label_curator/_tests/__init__.py
src/morphometrics/_gui/label_curator/_tests/test_label_cleaning.py
src/morphometrics/_gui/label_curator/_tests/test_label_curator.py
src/morphometrics/_gui/models/__init__.py
src/morphometrics/_gui/models/annotation_model.py
src/morphometrics/_gui/models/labeling_model.py
src/morphometrics/_gui/models/_tests/__init__.py
src/morphometrics/_gui/models/_tests/test_annotation_model.py
src/morphometrics/_gui/models/_tests/test_labeling_model.py
src/morphometrics/_tests/__init__.py
src/morphometrics/_tests/test_sample_data.py
src/morphometrics/_tests/test_types.py
src/morphometrics/_tests/test_widget.py
src/morphometrics/classify/__init__.py
src/morphometrics/classify/classify_utils.py
src/morphometrics/classify/random_forest.py
src/morphometrics/data/__init__.py
src/morphometrics/data/intensity_image.py
src/morphometrics/data/label_image.py
src/morphometrics/explore/__init__.py
src/morphometrics/explore/cluster.py
src/morphometrics/explore/dimensionality_reduction.py
src/morphometrics/explore/explore_utils.py
src/morphometrics/explore/sample.py
src/morphometrics/explore/_tests/__init__.py
src/morphometrics/explore/_tests/_explore_test_utils.py
src/morphometrics/explore/_tests/test_cluster.py
src/morphometrics/explore/_tests/test_dimensionality_reduction.py
src/morphometrics/explore/_tests/test_explore_utils.py
src/morphometrics/explore/_tests/test_sample.py
src/morphometrics/label/__init__.py
src/morphometrics/label/image_utils.py
src/morphometrics/label/stitch.py
src/morphometrics/label/_tests/__init__.py
src/morphometrics/label/_tests/test_image_utils.py
src/morphometrics/label/_tests/test_stitch.py
src/morphometrics/measure/__init__.py
src/morphometrics/measure/intensity.py
src/morphometrics/measure/label.py
src/morphometrics/measure/measure.py
src/morphometrics/measure/neighborhood.py
src/morphometrics/measure/surface.py
src/morphometrics/measure/_tests/__init__.py
src/morphometrics/measure/_tests/test_intensity.py
src/morphometrics/measure/_tests/test_label.py
src/morphometrics/measure/_tests/test_neighborhood.py
src/morphometrics/measure/_tests/test_surface.py
src/morphometrics/utils/__init__.py
src/morphometrics/utils/anndata_utils.py
src/morphometrics/utils/environment_utils.py
src/morphometrics/utils/image_utils.py
src/morphometrics/utils/math_utils.py
src/morphometrics/utils/napari_utils.py
src/morphometrics/utils/surface_utils.py
src/morphometrics/utils/_tests/__init__.py
src/morphometrics/utils/_tests/test_anndata_utils.py
src/morphometrics/utils/_tests/test_image_utils.py
src/morphometrics/utils/_tests/test_math_utils.py
src/morphometrics/utils/_tests/test_surface_utils.py