Metadata-Version: 2.1
Name: Plasmidsimilarity
Version: 1.0.1
Summary: Comparing plasmid sequences and its gene content
Home-page: https://github.com/casperjamin/Plasmidsimilarity
Author: Casper Jamin
Author-email: casperjamin@gmail.com
License: BSD license
Keywords: Plasmidsimilarity
Platform: UNKNOWN
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: BSD License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Requires-Python: >3.5
Description-Content-Type: text/markdown
Requires-Dist: tables
Requires-Dist: pyyaml
Requires-Dist: pandas
Requires-Dist: joblib
Requires-Dist: networkx
Requires-Dist: scipy
Requires-Dist: snakemake (<6)
Requires-Dist: matplotlib
Requires-Dist: seaborn
Requires-Dist: biopython

=================
Plasmidsimilarity
=================


.. image:: https://img.shields.io/pypi/v/Plasmidsimilarity.svg
        :target: https://pypi.python.org/pypi/Plasmidsimilarity

.. image:: https://img.shields.io/travis/casperjamin/Plasmidsimilarity.svg
        :target: https://travis-ci.com/casperjamin/Plasmidsimilarity

.. image:: https://readthedocs.org/projects/Plasmidsimilarity/badge/?version=latest
        :target: https://Plasmidsimilarity.readthedocs.io/en/latest/?version=latest
        :alt: Documentation Status




Set of scripts to compare plasmid sequences and its gene content


* Free software: BSD license
* Documentation: https://Plasmidsimilarity.readthedocs.io.


Installation
------------
to install::

    git clone https://github.com/casperjamin/Plasmidsimilarity
    cd Plasmidsimilarity
    pip install .




Features
--------

* TODO

Credits
-------

This package was created with Cookiecutter_ and the `audreyr/cookiecutter-pypackage`_ project template.

.. _Cookiecutter: https://github.com/audreyr/cookiecutter
.. _`audreyr/cookiecutter-pypackage`: https://github.com/audreyr/cookiecutter-pypackage


This work was supported by the Dutch workgroup Molecular typing for infectious diseases, the WMDI.


=======
History
=======

0.0.1 (2021-04-22)
------------------

* First release on PyPI.


