Metadata-Version: 1.1
Name: cellnopt.core
Version: 0.4.3
Summary: Functions to manipulate networks and data related to signalling pathways.
Home-page: ['http://pythonhosted.org/cellnopt.core/']
Author: Thomas Cokelaer
Author-email: cokelaer@ebi.ac.uk
License: GPL
Download-URL: ['http://pypi.python.org/pypi/cellnopt.core']
Description: The package cellnopt.core provides tools to manipulate networks and data related
        to signalling pathways. It provides I/O functions for SIF, MIDAS, SOP formats 
        and a convenient graph data structure called CNOGraph.
        
        Here is a simple example that creates a graph and plots it using dot/graphviz::
        
            from cellnopt.core import *
            c = CNOGraph()
            c.add_reaction("A=B")
            c.add_reaction("A+B=C")
            c.plotdot()
        
        For a full documentation, see the sphinx documentation in the ./doc directory.
        
        
        .. plot::
            :include-source:
        
            from cellnopt.core import *
            c = CNOGraph(cnodata("PKN-ToyMMB.sif"), cnodata("MD-ToyMMB.csv"))
            c.expand_and_gates()
        
        
        
        
Keywords: SIF,MIDAS,SOP,Kinexus,CellNOpt,CNOGraph
Platform: Linux
Platform: Unix
Platform: MacOsX
Platform: Windows
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU Library or Lesser General Public License (LGPL)
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 2.7
Classifier: Topic :: Software Development :: Libraries :: Python Modules
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Information Analysis
Classifier: Topic :: Scientific/Engineering :: Mathematics
Classifier: Topic :: Scientific/Engineering :: Physics
