.gitignore
.gitmodules
.hgignore
.pre-commit-config.yaml
.readthedocs.yml
CHANGELOG.md
MANIFEST.in
README.md
pyproject.toml
setup.cfg
tasklist.md
tox.ini
.github/workflows/python-package.yml
docs/Makefile
docs/make.bat
docs/source/conf.py
docs/source/index.rst
docs/source/mixes.rst
examples/tallrect.seed
examples/xor_ribbon.yaml
olddocs/Makefile
olddocs/alhambra.rst
olddocs/conf.py
olddocs/docrequirements.txt
olddocs/fileformat.rst
olddocs/index.rst
olddocs/modules.rst
olddocs/output_10_1.png
olddocs/output_17_0.png
olddocs/references.rst
olddocs/tutorial.rst
src/alhambra/__init__.py
src/alhambra/_tilesets_dx.py
src/alhambra/_version.py
src/alhambra/anneal.py
src/alhambra/classes.py
src/alhambra/drawing.py
src/alhambra/edotparen.py
src/alhambra/endreorder.py
src/alhambra/fastlatticedefect.py
src/alhambra/fastreduce.py
src/alhambra/fastreduceD.py
src/alhambra/flatish.py
src/alhambra/glues.py
src/alhambra/grid.py
src/alhambra/latticedefect.py
src/alhambra/mixes.py
src/alhambra/nuad.py
src/alhambra/py.typed
src/alhambra/quantitate.py
src/alhambra/seeds.py
src/alhambra/sensitivity.py
src/alhambra/sensitivitynew.py
src/alhambra/seq.py
src/alhambra/tiles.py
src/alhambra/tilesets.py
src/alhambra/util.py
src/alhambra.egg-info/PKG-INFO
src/alhambra.egg-info/SOURCES.txt
src/alhambra.egg-info/dependency_links.txt
src/alhambra.egg-info/entry_points.txt
src/alhambra.egg-info/requires.txt
src/alhambra.egg-info/top_level.txt
src/alhambra.egg-info/zip-safe
src/alhambra/data/rgb.txt
src/alhambra/peppercomps/tile_adapter_5up.comp
src/alhambra/peppercomps/tile_adapter_5up_1h.comp
src/alhambra/peppercomps/tile_adapter_5up_2h.comp
src/alhambra/peppercomps/tile_daoe_3up.comp
src/alhambra/peppercomps/tile_daoe_3up_2h.comp
src/alhambra/peppercomps/tile_daoe_5up.comp
src/alhambra/peppercomps/tile_daoe_5up_2h.comp
src/alhambra/peppercomps/tile_daoe_doublehoriz_35up.comp
src/alhambra/peppercomps/tile_daoe_doublehoriz_35up_1h2i.comp
src/alhambra/peppercomps/tile_daoe_doublehoriz_35up_2h3h.comp
src/alhambra/peppercomps/tile_daoe_doublehoriz_35up_3h4h.comp
src/alhambra/peppercomps/tile_daoe_doublehoriz_35up_4h5b.comp
src/alhambra/peppercomps/tile_daoe_doublehoriz_35up_4h5i.comp
src/alhambra/peppercomps/tile_daoe_doublevert_35up_2b3h.comp
src/alhambra/peppercomps/tile_daoe_doublevert_35up_2h3h.comp
src/alhambra/peppercomps/tile_daoe_doublevert_35up_4h5h.comp
src/alhambra/peppercomps-j1/tile_adapter_5up.comp
src/alhambra/peppercomps-j1/tile_adapter_5up_1h.comp
src/alhambra/peppercomps-j1/tile_adapter_5up_2h.comp
src/alhambra/peppercomps-j1/tile_daoe_3up.comp
src/alhambra/peppercomps-j1/tile_daoe_3up_2h.comp
src/alhambra/peppercomps-j1/tile_daoe_5up.comp
src/alhambra/peppercomps-j1/tile_daoe_5up_2h.comp
src/alhambra/peppercomps-j1/tile_daoe_doublehoriz_35up.comp
src/alhambra/peppercomps-j1/tile_daoe_doublehoriz_35up_1h2i.comp
src/alhambra/peppercomps-j1/tile_daoe_doublehoriz_35up_2h3h.comp
src/alhambra/peppercomps-j1/tile_daoe_doublehoriz_35up_3h4h.comp
src/alhambra/peppercomps-j1/tile_daoe_doublehoriz_35up_4h5b.comp
src/alhambra/peppercomps-j1/tile_daoe_doublehoriz_35up_4h5i.comp
src/alhambra/peppercomps-j1/tile_daoe_doublevert_35up_2b3h.comp
src/alhambra/peppercomps-j1/tile_daoe_doublevert_35up_2h3h.comp
src/alhambra/peppercomps-j1/tile_daoe_doublevert_35up_4h5h.comp
src/alhambra/peppercomps-nomidt/tile_daoe_3up.comp
src/alhambra/peppercomps-nomidt/tile_daoe_3up_2h.comp
src/alhambra/peppercomps-nomidt/tile_daoe_5up.comp
src/alhambra/peppercomps-nomidt/tile_daoe_5up_2h.comp
src/alhambra/peppercomps-nomidt/tile_daoe_doublehoriz_35up.comp
src/alhambra/peppercomps-nomidt/tile_daoe_doublehoriz_35up_1h2i.comp
src/alhambra/peppercomps-nomidt/tile_daoe_doublehoriz_35up_2h3h.comp
src/alhambra/peppercomps-nomidt/tile_daoe_doublehoriz_35up_3h4h.comp
src/alhambra/peppercomps-nomidt/tile_daoe_doublehoriz_35up_4h5b.comp
src/alhambra/peppercomps-nomidt/tile_daoe_doublehoriz_35up_4h5i.comp
src/alhambra/peppercomps-nomidt/tile_daoe_doublevert_35up_2b3h.comp
src/alhambra/peppercomps-nomidt/tile_daoe_doublevert_35up_2h3h.comp
src/alhambra/peppercomps-nomidt/tile_daoe_doublevert_35up_4h5h.comp
src/alhambra/seqdiagrambases/blank.svg
src/alhambra/seqdiagrambases/tile_adapter_5up.svg
src/alhambra/seqdiagrambases/tile_adapter_5up_1h.svg
src/alhambra/seqdiagrambases/tile_adapter_5up_2h.svg
src/alhambra/seqdiagrambases/tile_daoe_3up.svg
src/alhambra/seqdiagrambases/tile_daoe_3up_2h.svg
src/alhambra/seqdiagrambases/tile_daoe_5up.svg
src/alhambra/seqdiagrambases/tile_daoe_5up_2h.svg
src/alhambra/seqdiagrambases/tile_daoe_doublehoriz-abstract.svg
src/alhambra/seqdiagrambases/tile_daoe_doublehoriz_35up.svg
src/alhambra/seqdiagrambases/tile_daoe_doublehoriz_35up_1h2i.svg
src/alhambra/seqdiagrambases/tile_daoe_doublehoriz_35up_2h3h.svg
src/alhambra/seqdiagrambases/tile_daoe_doublehoriz_35up_4h5b.svg
src/alhambra/seqdiagrambases/tile_daoe_doublehoriz_35up_4h5i.svg
src/alhambra/seqdiagrambases/tile_daoe_doublevert-abstract.svg
src/alhambra/seqdiagrambases/tile_daoe_doublevert_35up.svg
src/alhambra/seqdiagrambases/tile_daoe_doublevert_35up_4h5h.svg
src/alhambra/seqdiagrambases/tile_daoe_single-abstract.svg
src/alhambra_old/old_ends.py
src/alhambra_old/old_seeds.py
src/alhambra_old/old_tiles.py
src/alhambra_old/old_tilesets.py
src/alhambra_old/old_tilestructures.py
src/alhambra_old/old_util.py
src/alhambra_old/scripts.py
src/alhambra_old/sensitivityprofiles.py
tests/test_seq.py