LICENSE
README.md
pyproject.toml
src/clonex/__init__.py
src/clonex/cli.py
src/clonex.egg-info/PKG-INFO
src/clonex.egg-info/SOURCES.txt
src/clonex.egg-info/dependency_links.txt
src/clonex.egg-info/entry_points.txt
src/clonex.egg-info/requires.txt
src/clonex.egg-info/top_level.txt
src/clonex/application/__init__.py
src/clonex/application/execution.py
src/clonex/application/local_generation.py
src/clonex/application/repo_sync.py
src/clonex/application/sync_with_remote.py
src/clonex/core/__init__.py
src/clonex/core/check.py
src/clonex/core/clone.py
src/clonex/core/failed_repos.py
src/clonex/core/parallel.py
src/clonex/core/process_control.py
src/clonex/core/pull.py
src/clonex/core/repo_config.py
src/clonex/core/workspace.py
src/clonex/domain/__init__.py
src/clonex/domain/models.py
src/clonex/domain/repo_groups.py
src/clonex/infra/__init__.py
src/clonex/infra/auth.py
src/clonex/infra/auto_gist_sync.py
src/clonex/infra/gist_config.py
src/clonex/infra/github_api.py
src/clonex/infra/logger.py
src/clonex/infra/paths.py
src/clonex/mcp/__init__.py
src/clonex/mcp/__main__.py
src/clonex/mcp/app.py
src/clonex/mcp/context.py
src/clonex/mcp/errors.py
src/clonex/mcp/server.py
src/clonex/mcp/tools/__init__.py
src/clonex/mcp/tools/batch.py
src/clonex/mcp/tools/execution.py
src/clonex/mcp/tools/flows.py
src/clonex/mcp/tools/groups.py
src/clonex/mcp/tools/queries.py
src/clonex/ui/__init__.py
src/clonex/ui/advanced_settings_dialog.py
src/clonex/ui/auto_sync_dialog.py
src/clonex/ui/chrome.py
src/clonex/ui/gist_manager_dialog.py
src/clonex/ui/main_window.py
src/clonex/ui/theme.py
src/clonex/ui/workers.py
tests/test_cli_paths.py
tests/test_clone_errors.py
tests/test_gist_discover.py
tests/test_repo_group_paths.py
tests/test_sync_with_remote.py
tests/test_workspace.py