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CHANGELOG.rst
CITATION.cff
LICENSE
MANIFEST.in
README.rst
codecov.yml
pyproject.toml
setup.py
docs/conf.py
docs/index.rst
docs/module_options.rst
docs/requirements-docs.txt
docs/_static/images/doi_image.svg
docs/_static/images/fingerprint.fodg
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docs/_static/images/overrepresented_sampling.fodg
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docs/includes/CHANGELOG.rst
docs/includes/README.rst
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docs/reports/21C125_R1.fastq.gz.html
docs/reports/GM24385_1.fastq.gz.html
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src/sequali/__init__.py
src/sequali/__main__.py
src/sequali/_qc.pyi
src/sequali/_qcmodule.c
src/sequali/_seqident.pyi
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src/sequali/_version.py
src/sequali/adapters.py
src/sequali/compiler_defs.h
src/sequali/debug_vectors.h
src/sequali/murmur3.h
src/sequali/py.typed
src/sequali/report_modules.py
src/sequali/score_to_error_rate.h
src/sequali/sequence_identification.py
src/sequali/util.py
src/sequali/wanghash.h
src/sequali.egg-info/PKG-INFO
src/sequali.egg-info/SOURCES.txt
src/sequali.egg-info/dependency_links.txt
src/sequali.egg-info/entry_points.txt
src/sequali.egg-info/requires.txt
src/sequali.egg-info/top_level.txt
src/sequali/adapters/adapter_list.tsv
src/sequali/contaminants/Illumina.fasta
src/sequali/contaminants/README
src/sequali/contaminants/UniVec.fasta
src/sequali/contaminants/common_human_repeats.fasta
src/sequali/contaminants/oxford_nanopore.fasta
src/sequali/contaminants/oxford_nanopore_barcodes.fasta
src/sequali/pygal.js/README.md
src/sequali/pygal.js/2.0.x/pygal-tooltips.js
src/sequali/pygal.js/2.0.x/pygal-tooltips.min.js
src/sequali/static/sequali_report.css
src/sequali/static/svg_to_download_link.js