LICENSE
README.md
setup.py
OGER.egg-info/PKG-INFO
OGER.egg-info/SOURCES.txt
OGER.egg-info/dependency_links.txt
OGER.egg-info/entry_points.txt
OGER.egg-info/requires.txt
OGER.egg-info/top_level.txt
oger/__init__.py
oger/__main__.py
oger/ctrl/__init__.py
oger/ctrl/__main__.py
oger/ctrl/parameters.py
oger/ctrl/router.py
oger/ctrl/run.py
oger/doc/__init__.py
oger/doc/becalm.py
oger/doc/bioc.py
oger/doc/brat.py
oger/doc/conll.py
oger/doc/document.py
oger/doc/europepmc.py
oger/doc/export.py
oger/doc/load.py
oger/doc/odin.py
oger/doc/pubanno.py
oger/doc/pubmed.py
oger/doc/pubtator.py
oger/doc/tsv.py
oger/doc/txt.py
oger/doc/xml.py
oger/er/__init__.py
oger/er/entity_recognition.py
oger/er/term_normalization.py
oger/eval/__init__.py
oger/eval/__main__.py
oger/eval/term_coverage.py
oger/nlp/__init__.py
oger/nlp/tokenize.py
oger/post/__init__.py
oger/post/badFP.py
oger/post/submatches.py
oger/server/__init__.py
oger/server/__main__.py
oger/server/client.py
oger/server/expfmts.py
oger/server/restfulserver.py
oger/server/static/form.html
oger/test/__init__.py
oger/test/__main__.py
oger/test/tester.py
oger/test/testfiles/test_terms.tsv
oger/test/testfiles/bioc_json/collection.json
oger/test/testfiles/bioc_json/everything-sentence.json
oger/test/testfiles/bioc_json/everything.json
oger/test/testfiles/bioc_xml/10952997.xml
oger/test/testfiles/bioc_xml/14557244.xml
oger/test/testfiles/bioc_xml/18617507.xml
oger/test/testfiles/bioc_xml/19127978.xml
oger/test/testfiles/bioc_xml/21980305.xml
oger/test/testfiles/bioc_xml/9722616.xml
oger/test/testfiles/conll/PMC6930xxx.conll
oger/test/testfiles/idfiles/bad_pmcids.txt
oger/test/testfiles/idfiles/fictious_pmcids.txt
oger/test/testfiles/idfiles/good_pmcids.txt
oger/test/testfiles/idfiles/pubmed_pmids.txt
oger/test/testfiles/idfiles/pxml_pmids.txt
oger/test/testfiles/idfiles/pxml_pmids_dl.txt
oger/test/testfiles/idfiles/random_pmcids.txt
oger/test/testfiles/idfiles/txt_ids.txt
oger/test/testfiles/pubtator/BC5CDR-example.txt
oger/test/testfiles/pubtator/NCBIdevelopset_corpus.txt
oger/test/testfiles/pubtator/tutorial-example.txt
oger/test/testfiles/pubtator_fbk/10381787.txt
oger/test/testfiles/pxml/3010203.pxml
oger/test/testfiles/pxml/3010205.pxml
oger/test/testfiles/pxml/3010206.pxml
oger/test/testfiles/pxml/3010207.pxml
oger/test/testfiles/pxml/3010208.pxml
oger/test/testfiles/pxml/3010209.pxml
oger/test/testfiles/pxml/3010210.pxml
oger/test/testfiles/pxml/3010211.pxml
oger/test/testfiles/pxml/3010213.pxml
oger/test/testfiles/pxml/3010214.pxml
oger/test/testfiles/pxml/3010215.pxml
oger/test/testfiles/pxml/3010217.pxml
oger/test/testfiles/pxml/3010219.pxml
oger/test/testfiles/pxml/3010220.pxml
oger/test/testfiles/pxml/3010221.pxml
oger/test/testfiles/pxml/3010222.pxml
oger/test/testfiles/pxml/3010223.pxml
oger/test/testfiles/pxml/3010224.pxml
oger/test/testfiles/pxml/3010227.pxml
oger/test/testfiles/pxml/3010233.pxml
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oger/test/testfiles/pxml/3010240.pxml
oger/test/testfiles/pxml/3010241.pxml
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oger/test/testfiles/pxml/3010250.pxml
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oger/test/testfiles/pxml/3010260.pxml
oger/test/testfiles/pxml/3010262.pxml
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oger/test/testfiles/pxml/3010279.pxml
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oger/test/testfiles/pxml/3010284.pxml
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oger/test/testfiles/pxml/3010290.pxml
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oger/test/testfiles/pxml/3010293.pxml
oger/test/testfiles/pxml/3010294.pxml
oger/test/testfiles/pxml/3010295.pxml
oger/test/testfiles/pxml/3010296.pxml
oger/test/testfiles/pxml/3010299.pxml
oger/test/testfiles/pxml.gz/medline16n0005_sampled.xml.gz
oger/test/testfiles/txt/13370108.txt
oger/test/testfiles/txt/13370192.txt
oger/test/testfiles/txt/13370273.txt
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oger/test/testfiles/txt/13373406.txt
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oger/test/testfiles/txt/13377340.txt
oger/test/testfiles/txt/13377399.txt
oger/test/testfiles/txt/13377554.txt
oger/test/testfiles/txt/13378003.txt
oger/test/testfiles/txt/13378420.txt
oger/test/testfiles/txt/13378675.txt
oger/test/testfiles/txt/13379545.txt
oger/test/testfiles/txt/binary.data
oger/test/testfiles/txt/empty.txt
oger/test/testfiles/txt/wrongformat.fantasyformat
oger/test/testfiles/txt.tar/PMC6930xxx.tar.xz
oger/test/testfiles/txt_json/1337.txt.json
oger/test/testfiles/txt_tsv/test.tsv
oger/util/__init__.py
oger/util/iterate.py
oger/util/misc.py
oger/util/stream.py