matplotlib
mygene
ndex2
numpy>=1.20.0
pyOpenSSL>=23.1.1
pyyaml
scikit-learn>=1.0.0
scipy
tqdm

[dev]
bump2version
click
jinja2
parameterized
pre-commit
pytest
pytest-cov
pytest-mock
pytest-subtests
pytest-xdist
requests-mock
tabulate
tox

[doc]
sphinx
sphinx-autodoc-typehints
sphinx_rtd_theme
sphinxcontrib-napoleon
yacs

[ext]
grape
pecanpy
scikit-network
networkx

[full]
obnb[ext,pyroe]

[pyroe]
pyroe
scanpy
