Metadata-Version: 1.0
Name: isimage
Version: 0.1.2
Summary: A module and scripts for analysis of whole-mount in-situ hybridisation images.
Home-page: https://github.com/ilyapatrushev/isimage
Author: Ilya Patrushev
Author-email: ilya.patrushev@gmail.com
License: GPL v2.0
Description-Content-Type: UNKNOWN
Description: The package consists of isimage module and analyse_image and select_images
        command line scripts. Test data and images for the scripts will be installed
        in the corresponding subfolders of isimage package.
        
        Installation:
        
        The package depends on OpenCV >= 3.0.0. Please install it from www.opencv.org.
        Multithreading functionality of select_images script depends on IPython.parallel, 
        however this dependency is optional.
        
        Windows:
        The easiest way, is to install Anaconda package first. Then run pip and command 
        line tools in Anaconda's console.
        
        Linux:
        Before installation please make sure you have jpeg-dev and tiff-dev packages 
        installed.
        
        Then run pip install isimage
        
        Command line tools usage examples:
        
        analyse_image -i <isimage installation path>/isimage/analyse_image/test_images/17-BLIMP-DOR003.jpg -o test_result.pptx
        
        select_images -g <isimage installation path>/isimage/select_images/test_tasks.txt -c <isimage installation path>/isimage/select_images/cleared_model.dump -r result -p8
        
        
Platform: UNKNOWN
