CHANGELOG.md
CITATION.cff
CONTRIBUTING.md
LICENSE
MANIFEST.in
README.md
model-integration.json
model-source.json
pyproject.toml
docs/api-guide.md
docs/capabilities.md
docs/changelog.md
docs/concepts.md
docs/data.md
docs/documentation.md
docs/extraction-validation.json
docs/figure-provenance.md
docs/getting-started.md
docs/grouped-learned-state-space-results.json
docs/grouped-state-space-results.json
docs/grouped-state-space.md
docs/index.md
docs/migration.md
docs/model-integration.md
docs/model-mathematics.md
docs/releasing.md
docs/scr-responses.md
docs/temporal-kernels.md
docs/test-migration.json
docs/testing.md
docs/tutorials.md
docs/api/configuration.md
docs/api/data-results.md
docs/api/estimators.md
docs/api/evaluation.md
docs/api/responses.md
docs/performance/2026-09-19-apple-mps-feasibility.md
docs/performance/2026-09-21-gp-algorithmic-opportunities.md
docs/performance/2026-09-21-gp-speedup-experiments.md
docs/performance/2026-09-21-linux-cuda-gpu-opportunities.md
docs/performance/r-map-initialization-results.json
docs/performance/r-map-initialization.md
docs/plans/2026-09-21-distribution-infrastructure.md
docs/plans/2026-09-21-model-extraction.md
docs/superpowers/plans/2026-09-21-post-release-linux-performance-evaluation.md
examples/gp_map_quickstart.py
examples/r_quickstart.py
examples/scr_quickstart.py
scripts/benchmark_gp_loading_collapse.py
scripts/benchmark_gp_node_filter.py
scripts/benchmark_grouped_state_space.py
scripts/benchmark_r_initialization.py
scripts/build_api_reference.py
scripts/build_kernel_figures.py
scripts/check_release.py
scripts/check_test_report.py
scripts/ci_policy.py
scripts/run_model_tests.py
scripts/sync_changelog.py
src/multimodalsrm/__init__.py
src/multimodalsrm/_bateman.py
src/multimodalsrm/_observation_preparation.py
src/multimodalsrm/_parallel.py
src/multimodalsrm/_version.py
src/multimodalsrm/alignment.py
src/multimodalsrm/bateman_operators.py
src/multimodalsrm/calibration.py
src/multimodalsrm/data.py
src/multimodalsrm/estimator.py
src/multimodalsrm/grouping.py
src/multimodalsrm/inference.py
src/multimodalsrm/initialization.py
src/multimodalsrm/inspection.py
src/multimodalsrm/kernel_optimization.py
src/multimodalsrm/kernels.py
src/multimodalsrm/objective.py
src/multimodalsrm/operators.py
src/multimodalsrm/optimization.py
src/multimodalsrm/posterior_results.py
src/multimodalsrm/results.py
src/multimodalsrm/selection.py
src/multimodalsrm/validation.py
src/multimodalsrm.egg-info/PKG-INFO
src/multimodalsrm.egg-info/SOURCES.txt
src/multimodalsrm.egg-info/dependency_links.txt
src/multimodalsrm.egg-info/requires.txt
src/multimodalsrm.egg-info/top_level.txt
src/multimodalsrm/bayesian/__init__.py
src/multimodalsrm/bayesian/_archive.py
src/multimodalsrm/bayesian/_backend.py
src/multimodalsrm/bayesian/baselines.py
src/multimodalsrm/bayesian/blocks.py
src/multimodalsrm/bayesian/calibration.py
src/multimodalsrm/bayesian/calibration_archive.py
src/multimodalsrm/bayesian/calibration_problem.py
src/multimodalsrm/bayesian/covariance_pairs.py
src/multimodalsrm/bayesian/diagnostics.py
src/multimodalsrm/bayesian/environment.py
src/multimodalsrm/bayesian/execution.py
src/multimodalsrm/bayesian/factorization.py
src/multimodalsrm/bayesian/fitting.py
src/multimodalsrm/bayesian/gp_hyperparameters.py
src/multimodalsrm/bayesian/grouped.py
src/multimodalsrm/bayesian/grouped_score.py
src/multimodalsrm/bayesian/identity.py
src/multimodalsrm/bayesian/map_conditioning.py
src/multimodalsrm/bayesian/map_parallel.py
src/multimodalsrm/bayesian/model.py
src/multimodalsrm/bayesian/multifactor.py
src/multimodalsrm/bayesian/multifactor_cholesky.py
src/multimodalsrm/bayesian/multifactor_score.py
src/multimodalsrm/bayesian/noise_profile.py
src/multimodalsrm/bayesian/observation_adapter.py
src/multimodalsrm/bayesian/orientation_diagnostics.py
src/multimodalsrm/bayesian/orientation_persistence.py
src/multimodalsrm/bayesian/orthogonal.py
src/multimodalsrm/bayesian/persistence.py
src/multimodalsrm/bayesian/polishing.py
src/multimodalsrm/bayesian/posterior_coordinates.py
src/multimodalsrm/bayesian/posterior_participants.py
src/multimodalsrm/bayesian/posterior_persistence.py
src/multimodalsrm/bayesian/posterior_updates.py
src/multimodalsrm/bayesian/prediction.py
src/multimodalsrm/bayesian/priors.py
src/multimodalsrm/bayesian/problem.py
src/multimodalsrm/bayesian/quality.py
src/multimodalsrm/bayesian/r_initialization.py
src/multimodalsrm/bayesian/rank_diagnostics.py
src/multimodalsrm/bayesian/reference.py
src/multimodalsrm/bayesian/refinement_coordinates.py
src/multimodalsrm/bayesian/response_quadrature.py
src/multimodalsrm/bayesian/response_scope.py
src/multimodalsrm/bayesian/results.py
src/multimodalsrm/bayesian/spectral.py
src/multimodalsrm/bayesian/state_space.py
src/multimodalsrm/bayesian/state_space_compact.py
src/multimodalsrm/bayesian/state_space_delays.py
src/multimodalsrm/bayesian/state_space_gaussian.py
src/multimodalsrm/bayesian/state_space_gaussian_rational.py
src/multimodalsrm/bayesian/state_space_grouped.py
src/multimodalsrm/bayesian/state_space_parameters.py
src/multimodalsrm/bayesian/state_space_rational.py
src/multimodalsrm/bayesian/state_space_responses.py
src/multimodalsrm/bayesian/temporal_noise.py
src/multimodalsrm/bayesian/timing.py
src/multimodalsrm/bayesian/trajectories.py
src/multimodalsrm/bayesian/transform.py
src/multimodalsrm/bayesian/updated_posterior_persistence.py
src/multimodalsrm/bayesian/warmup_checkpoint.py
src/multimodalsrm/bayesian/workflow.py
tests/__init__.py
tests/smoke-tests.json
tests/bayesian/__init__.py
tests/bayesian/test_bateman_scr.py
tests/bayesian/test_bayesian_analytic_score.py
tests/bayesian/test_bayesian_bateman_posterior.py
tests/bayesian/test_bayesian_blocks.py
tests/bayesian/test_bayesian_calibration.py
tests/bayesian/test_bayesian_covariance_pairs.py
tests/bayesian/test_bayesian_diagnostics.py
tests/bayesian/test_bayesian_environment.py
tests/bayesian/test_bayesian_factorization.py
tests/bayesian/test_bayesian_filter_recovery.py
tests/bayesian/test_bayesian_fit_quality.py
tests/bayesian/test_bayesian_frozen.py
tests/bayesian/test_bayesian_gamma_posterior.py
tests/bayesian/test_bayesian_gp_timescale.py
tests/bayesian/test_bayesian_grouped.py
tests/bayesian/test_bayesian_instantaneous.py
tests/bayesian/test_bayesian_map_conditioning.py
tests/bayesian/test_bayesian_map_parallel.py
tests/bayesian/test_bayesian_mixed_responses.py
tests/bayesian/test_bayesian_model.py
tests/bayesian/test_bayesian_multifactor.py
tests/bayesian/test_bayesian_multifactor_cpu.py
tests/bayesian/test_bayesian_multifactor_posterior.py
tests/bayesian/test_bayesian_multifactor_refinement.py
tests/bayesian/test_bayesian_multifactor_workflow.py
tests/bayesian/test_bayesian_noise_profile.py
tests/bayesian/test_bayesian_optional_conventions.py
tests/bayesian/test_bayesian_orientation_diagnostics.py
tests/bayesian/test_bayesian_orientation_sampling.py
tests/bayesian/test_bayesian_orthogonal_kernel.py
tests/bayesian/test_bayesian_parallel.py
tests/bayesian/test_bayesian_parameter_scaling.py
tests/bayesian/test_bayesian_persistence.py
tests/bayesian/test_bayesian_polishing_guard.py
tests/bayesian/test_bayesian_posterior_evidence.py
tests/bayesian/test_bayesian_posterior_participants.py
tests/bayesian/test_bayesian_posterior_persistence.py
tests/bayesian/test_bayesian_posterior_updates.py
tests/bayesian/test_bayesian_prediction.py
tests/bayesian/test_bayesian_problem.py
tests/bayesian/test_bayesian_quadrature_accuracy.py
tests/bayesian/test_bayesian_r_initialization.py
tests/bayesian/test_bayesian_reference.py
tests/bayesian/test_bayesian_refinement.py
tests/bayesian/test_bayesian_residual_diagnostics.py
tests/bayesian/test_bayesian_run_baselines.py
tests/bayesian/test_bayesian_sampler_geometry.py
tests/bayesian/test_bayesian_spectral.py
tests/bayesian/test_bayesian_state_space.py
tests/bayesian/test_bayesian_state_space_delays.py
tests/bayesian/test_bayesian_state_space_gaussian.py
tests/bayesian/test_bayesian_state_space_parameters.py
tests/bayesian/test_bayesian_state_space_responses.py
tests/bayesian/test_bayesian_state_space_scr.py
tests/bayesian/test_bayesian_temporal_noise.py
tests/bayesian/test_bayesian_timing.py
tests/bayesian/test_bayesian_trajectories.py
tests/bayesian/test_bayesian_transform.py
tests/bayesian/test_bayesian_updated_persistence.py
tests/bayesian/test_bayesian_warmup_checkpoint.py
tests/bayesian/test_bayesian_workflow.py
tests/bayesian/test_removed_bach_archive.py
tests/bayesian/test_state_space_compact_gaussian.py
tests/bayesian/test_state_space_delays.py
tests/bayesian/test_state_space_gaussian.py
tests/bayesian/test_state_space_gaussian_method.py
tests/bayesian/test_state_space_grouped.py
tests/bayesian/test_state_space_grouped_learned.py
tests/bayesian/test_state_space_optional_conventions.py
tests/bayesian/test_state_space_parameter_workflows.py
tests/bayesian/test_state_space_parameters.py
tests/bayesian/test_state_space_rational.py
tests/bayesian/test_state_space_responses.py
tests/core/__init__.py
tests/core/test_alignment_centering.py
tests/core/test_bateman_scr.py
tests/core/test_gaussian_operator_exact.py
tests/core/test_multimodal_alignment.py
tests/core/test_multimodal_calibration.py
tests/core/test_multimodal_components.py
tests/core/test_multimodal_cpu_algebra.py
tests/core/test_multimodal_fit.py
tests/core/test_multimodal_inference.py
tests/core/test_multimodal_initialization.py
tests/core/test_multimodal_inspection.py
tests/core/test_multimodal_kernel_acceleration.py
tests/core/test_multimodal_loading_scaling.py
tests/core/test_multimodal_optimization.py
tests/core/test_multimodal_parallel.py
tests/core/test_multimodal_primitives.py
tests/core/test_multimodal_reproducibility.py
tests/core/test_multimodal_scale.py
tests/core/test_multimodal_selection.py
tests/core/test_multimodal_shared_default.py
tests/core/test_multimodal_timing.py
tests/core/test_multimodal_validation.py
tests/core/test_observation_preparation.py
tests/infrastructure/test_changelog.py
tests/infrastructure/test_ci_policy.py
tests/infrastructure/test_ci_workflows.py
tests/infrastructure/test_model_test_report.py
tests/infrastructure/test_package.py
tests/infrastructure/test_release_gate.py
tests/infrastructure/test_sharding.py
tests/reference/__init__.py
tests/reference/continuous_covariance.py
tests/reference/multifactor_fixture.py
tests/reference/optimization_fixture.py
tests/reference/participant_conditioning.py
tests/reference/posterior_fixture.py