Package csb :: Package bio :: Package structure :: Class ChainResiduesCollection |
[frames] | no frames]

# Class ChainResiduesCollection

source code

                  object --+
                           |
        core.AbstractIndexer --+
                               |
    core.BaseCollectionContainer --+
                                   |
            core.CollectionContainer --+
                                       |
                                      ChainResiduesCollection

Instance Methods
__init__(self, chain, residues) x.__init__(...) initializes x; see help(type(x)) for signature | source code
__repr__(self) repr(x) | source code
int |
append(self, residue) Append a new residue to the chain. | source code
Inherited from `core.BaseCollectionContainer`: `__bool__`, `__contains__`, `__getitem__`, `__iter__`, `__len__`, `__nonzero__` Inherited from `object`: `__delattr__`, `__format__`, `__getattribute__`, `__hash__`, `__new__`, `__reduce__`, `__reduce_ex__`, `__setattr__`, `__sizeof__`, `__str__`, `__subclasshook__`

Properties
Inherited from `core.BaseCollectionContainer`: `last_index`, `length`, `start_index` Inherited from `object`: `__class__`

Method Details

### __init__(self, chain, residues) (Constructor) | source code
x.__init__(...) initializes x; see help(type(x)) for signature Parameters: `items` - initialization list `type` - if defined, makes the container type-safe `start_index` - the index of the zero element Overrides: object.__init__ (inherited documentation)

### __repr__(self) (Representation operator) | source code
repr(x) Overrides: object.__repr__ (inherited documentation)

### append(self, residue) | source code
Append a new residue to the chain. Parameters: `residue` (Residue) - the new residue Returns: int the index of the new element Raises: `DuplicateResidueIDError` - if a residue with the same ID already exists Overrides: core.CollectionContainer.append