| 0 |
gene_name_h |
Human gene name |
| 1 |
gene_id_h |
Human gene ID |
| 2 |
tx_id_h |
Human transcript ID |
| 3 |
chr_h |
Human chromosome number |
| 4 |
exon_num_h |
Total number of exons of the human transcript |
| 5 |
strand_h |
Positive or Negative strand of the human transcript on the chromosome |
| 6 |
match |
The computed reference sequence by given coordinate is matched with the input reference sequence or not |
| 7 |
start_h | end_h |
Start and end position of the human variant on the chromosome in MAF format |
| 8 |
ref_seq_h | alt_seq_h |
Reference and alternate sequence of the human variant on the chromosome in MAF format |
| 9 |
HGVSc_h | HGVSp_h |
HGVSc and HGVSp expression of the human variant |
| 10 |
classification_h |
Human variant effect classification, including missense/nonsense/in-frame indel/fram-shift indel/intron, etc. |
| 11 |
exon_h |
Exon/Intron location of the given human mutation, for example, E_7/I_5 |
| 12 |
type_h |
Human variant type in MAF format, including SNP/DNP/TNO/ONP/INS/DEL |
| 13 |
status |
This mutation can be modeled in the given target transcript or not, True or False |
| 14 |
class |
H2M modeling result class, 0-5 |
| 15 |
statement |
Statement of the H2M result class |
| 16 |
flank_size_left | flank_size_right |
Length of the identical sequences between human and mouse on the left/right side of the mutation |
| 17 |
gene_name_m |
Mouse gene name |
| 18 |
gene_id_m |
Mouse gene ID |
| 19 |
tx_id_m |
Mouse transcript ID |
| 20 |
chr_m |
Mouse chromosome number |
| 21 |
exon_num_m |
Total number of exons of the mouse transcript |
| 22 |
strand_m |
Positive or negative strand of the mouse transcript on the chromosome |
| 23 |
type_m |
Mouse variant type in MAF format, including SNP/DNP/TNO/ONP/INS/DEL |
| 24 |
classification_m |
Mouse variant effect classification |
| 25 |
exon_m |
Exon/Intron location of the murine mutation |
| 26 |
start_m_ori | end_m_ori |
Start and end position of the mouse variant (with exactly the same DNA change) on the chromosome in MAF format |
| 27 |
ref_seq_m_ori | alt_seq_m_ori |
Reference and alternate sequence of the mouse variant (with exactly the same DNA change) on the chromosome in MAF format |
| 28 |
HGVSc_m_ori | HGVSp_m_ori |
HGVSc and HGVSp expression of the mouse variant (with exactly the same DNA change) |
| 29 |
start_m | end_m |
Start and end position of the mouse variant (with the same amino acid change) on the chromosome in MAF format |
| 30 |
ref_seq_m | alt_seq_m |
Reference and alternate sequence of the mouse variant (with the same amino acid change) on the chromosome in MAF format |
| 31 |
HGVSc_m | HGVSp_m |
HGVSc and HGVSp expression of the mouse variant (with the same amino acid change) |
