LICENSE
README.md
pyproject.toml
src/massflow.egg-info/PKG-INFO
src/massflow.egg-info/SOURCES.txt
src/massflow.egg-info/dependency_links.txt
src/massflow.egg-info/requires.txt
src/massflow.egg-info/top_level.txt
src/massflow/data_manager/__init__.py
src/massflow/data_manager/ion_image_data_manager.py
src/massflow/data_manager/ion_image_data_manager_binary.py
src/massflow/data_manager/ion_image_data_manager_h5.py
src/massflow/data_manager/ion_image_data_manager_zarr.py
src/massflow/data_manager/ms_data_manager.py
src/massflow/data_manager/ms_data_manager_imzml.py
src/massflow/data_manager/ms_data_manager_zarr.py
src/massflow/module/__init__.py
src/massflow/module/mass_spectrum_set.py
src/massflow/module/ms_meta_data.py
src/massflow/module/ms_meta_data_imzml.py
src/massflow/module/ms_meta_data_zarr.py
src/massflow/module/pixel_coordinates.py
src/massflow/module/spectrum.py
src/massflow/module/spectrum_imzml.py
src/massflow/module/spectrum_zarr.py
src/massflow/morch/__init__.py
src/massflow/morch/ion_image_binary_dataset.py
src/massflow/morch/ion_image_dataset.py
src/massflow/morch/ion_image_h5_dataset.py
src/massflow/morch/ion_image_zarr_dataset.py
src/massflow/msi_zarr/__init__.py
src/massflow/msi_zarr/reader.py
src/massflow/msi_zarr/schema.py
src/massflow/msi_zarr/writer.py
src/massflow/preprocess/__init__.py
src/massflow/preprocess/api.py
src/massflow/preprocess/flat_pre_fun.py
src/massflow/preprocess/preprocessor.py
src/massflow/preprocess/helper/__init__.py
src/massflow/preprocess/helper/adduct_filter_helper.py
src/massflow/preprocess/helper/baseline_correction_helper.py
src/massflow/preprocess/helper/est_noise_helper.py
src/massflow/preprocess/helper/isotope_filter_helper.py
src/massflow/preprocess/helper/noise_reduction_helper.py
src/massflow/preprocess/helper/normalizer_helper.py
src/massflow/preprocess/helper/peak_align_helper.py
src/massflow/preprocess/helper/peak_pick_helper.py
src/massflow/preprocess/helper/stat_filter_helper.py
src/massflow/preprocess/numba/__init__.py
src/massflow/preprocess/numba/adduct_filter_numba.py
src/massflow/preprocess/numba/baseline_correction_numba.py
src/massflow/preprocess/numba/est_noise_numba.py
src/massflow/preprocess/numba/isotope_filter_numba.py
src/massflow/preprocess/numba/noise_reduction_numba.py
src/massflow/preprocess/numba/normalization_numba.py
src/massflow/preprocess/numba/numba_runtime.py
src/massflow/preprocess/numba/peak_align_numba.py
src/massflow/preprocess/numba/peak_pick_numba.py
src/massflow/preprocess/numba/stat_filter_numba.py
src/massflow/preprocess/pipeline/__init__.py
src/massflow/preprocess/pipeline/dataset_executor.py
src/massflow/preprocess/pipeline/flat_executor.py
src/massflow/preprocess/pipeline/planner.py
src/massflow/preprocess/pipeline/runner.py
src/massflow/preprocess/pipeline/types.py
src/massflow/r_preprocess/__init__.py
src/massflow/r_preprocess/adapter.py
src/massflow/r_preprocess/environment.py
src/massflow/segmentation/__init__.py
src/massflow/segmentation/cluster_segmentation.py
src/massflow/segmentation/region_mask.py
src/massflow/segmentation/segmentation_pipeline.py
src/massflow/segmentation/umap_kmeans.py
src/massflow/tools/__init__.py
src/massflow/tools/dm_process.py
src/massflow/tools/export_imzml.py
src/massflow/tools/funs.py
src/massflow/tools/imzml_monkey_patch.py
src/massflow/tools/infer_spectrum_type.py
src/massflow/tools/ion_major_temp_store.py
src/massflow/tools/logger.py
src/massflow/tools/plot.py
src/massflow/tools/plot_adduct_filter.py
src/massflow/tools/plot_ion_image.py
src/massflow/tools/plot_peak_filter.py
src/massflow/tools/read_flat.py
src/massflow/tools/read_matrix.py
src/massflow/tools/snr.py
src/massflow/tools/stream_imzml_writer.py
tests/test_adduct_filter.py
tests/test_async_pipeline.py
tests/test_baseline.py
tests/test_est.py
tests/test_export_imzml.py
tests/test_ion_image_binary.py
tests/test_ion_image_dataloader_benchmark.py
tests/test_ion_image_h5.py
tests/test_ion_image_zarr.py
tests/test_isotope_filter.py
tests/test_main_plot.py
tests/test_ms_data_manager_zarr.py
tests/test_noise_reduction.py
tests/test_normalization.py
tests/test_numba_runtime.py
tests/test_peak_alignment.py
tests/test_peak_filter.py
tests/test_peak_pick.py
tests/test_plot_ion_image.py
tests/test_read.py
tests/test_swap.py
tests/test_tools.py
tests/test_umap_kmeans.py