CHANGELOG.md
LICENSE
MANIFEST.in
README.md
pyproject.toml
pytest.ini
boltz2_client/__init__.py
boltz2_client/__main__.py
boltz2_client/a3m_to_csv_converter.py
boltz2_client/client.py
boltz2_client/exceptions.py
boltz2_client/models.py
boltz2_client/msa_search.py
boltz2_client/multi_endpoint_client.py
boltz2_client/utils.py
boltz2_client/virtual_screening.py
boltz2_client/a3m/__init__.py
boltz2_client/a3m/converter.py
boltz2_client/a3m/pairing.py
boltz2_client/a3m/parser.py
boltz2_client/cli/__init__.py
boltz2_client/cli/info.py
boltz2_client/cli/msa.py
boltz2_client/cli/predict.py
boltz2_client/cli/screen.py
boltz2_client/data/__init__.py
boltz2_client/data/speclist.txt
boltz2_python_client.egg-info/PKG-INFO
boltz2_python_client.egg-info/SOURCES.txt
boltz2_python_client.egg-info/dependency_links.txt
boltz2_python_client.egg-info/entry_points.txt
boltz2_python_client.egg-info/requires.txt
boltz2_python_client.egg-info/top_level.txt
docs/a3m_to_multimer_msa.md
docs/affinity_prediction.md
docs/async.md
docs/covalent_complex.md
docs/deployment.md
docs/development.md
docs/migration-0.6.md
docs/msa_search.md
docs/multi_endpoint.md
docs/outputs.md
docs/parameters.md
docs/refresh-review.md
docs/virtual_screening.md
docs/yaml.md
examples/README.md
examples/msa_search.py
examples/multi_endpoint.py
examples/nim_1_9.py
examples/paired_msa.py
examples/predict.py
examples/predict_yaml.py
examples/screen.py
examples/data/nim_1_9_request.json
examples/data/protein_ligand.yaml
examples/notebooks/01_protein_prediction.ipynb
examples/notebooks/02_protein_complexes.ipynb
examples/notebooks/03_cdk4_affinity.ipynb
examples/notebooks/04_protein_dna_complex.ipynb
examples/notebooks/05_covalent_ligand.ipynb
licenses/PyYAML-LICENSE
licenses/README.md
licenses/aiofiles-LICENSE
licenses/aiohttp-LICENSE
licenses/click-LICENSE
licenses/httpx-LICENSE
licenses/py3Dmol-LICENSE
licenses/pydantic-LICENSE
licenses/rich-LICENSE
licenses/typing-extensions-LICENSE
scripts/start_local_nim.sh
scripts/validate_cli.sh
scripts/validate_live_nim.py
scripts/validate_notebooks.py
tests/__init__.py
tests/conftest.py
tests/constants.py
tests/test_a3m_to_csv_converter.py
tests/test_basic.py
tests/test_cli_multi_endpoint.py
tests/test_comprehensive_stress.py
tests/test_examples_syntax.py
tests/test_integration_scenarios.py
tests/test_live_endpoints.py
tests/test_live_workflows.py
tests/test_msa_search.py
tests/test_multi_endpoint_functionality.py
tests/test_multi_endpoint_reliability.py
tests/test_nim_19.py
tests/test_notebooks.py
tests/data/protein_A.a3m
tests/data/protein_A_large.a3m
tests/data/protein_A_large.fasta
tests/data/protein_B.a3m
tests/data/protein_B_large.a3m
tests/data/protein_B_large.fasta
tests/data/sample_protein.a3m
tests/fixtures/nim_1_9_request_schema.json