README.md
setup.py
autopacmen/__init__.py
autopacmen/analysis_fva_comparison.py
autopacmen/analysis_fva_prot_pool.py
autopacmen/compare_gecko_and_gecko_analogon.py
autopacmen/data_create_combined_kcat_database.py
autopacmen/data_parse_bigg_metabolites_file.py
autopacmen/data_parse_brenda_json_for_model.py
autopacmen/data_parse_brenda_textfile.py
autopacmen/data_parse_sabio_rk_for_model.py
autopacmen/ec_model_2019_06_25_CALIBRATOR_get_reaction_flux_control_and_differential_reactions.py
autopacmen/ec_model_2019_06_25_analysis_fva_prot_pool.py
autopacmen/ec_model_2019_06_25_data_read_supplementary_table_of_keff_paper.py
autopacmen/ec_model_2019_06_25_data_scenarios_for_moment_comparison.py
autopacmen/ec_model_2019_06_25_data_scenarios_for_optimization.py
autopacmen/ec_model_2019_06_25_data_set_up_model.py
autopacmen/ec_model_2019_06_25_data_standard_exchange_scenario.py
autopacmen/ec_model_2019_06_25_figure_comparison_with_other_models_with_monk_et_al_values.py
autopacmen/ec_model_2019_06_25_figure_fva_variability_data.py
autopacmen/ec_model_2019_06_25_figure_secretion_behavior_on_different_maximal_glucose_uptake_rates.py
autopacmen/ec_model_2019_06_25_fva_comparison.py
autopacmen/ec_model_2019_06_25_leucine_test.py
autopacmen/ec_model_2019_06_25_modeling_create_gecko_model.py
autopacmen/ec_model_2019_06_25_optimization_apply_fmincon_optimized_kcats.py
autopacmen/ec_model_2019_06_25_optimization_apply_manual_changes.py
autopacmen/ec_model_2019_06_25_original_generate_comparable_model.py
autopacmen/ec_model_2019_06_25_sMOMENT_iJO_CREATION.py
autopacmen/ec_model_2019_06_25_test_comparison_with_other_models_adadi_et_al_values.py
autopacmen/ec_model_2019_06_25_test_iJO1366star_original_gecko_comparison.py
autopacmen/ec_model_2019_06_25_test_properties_original_and_smoment_model.py
autopacmen/modeling_create_gecko_model.py
autopacmen/modeling_create_smoment_model.py
autopacmen/modeling_get_initial_spreadsheets.py
autopacmen/modeling_get_protein_mass_mapping.py
autopacmen/modeling_get_reactions_kcat_mapping.py
autopacmen/optimization_apply_manual_changes.py
autopacmen/submodules/__init__.py
autopacmen/submodules/apply_manual_changes.py
autopacmen/submodules/create_combined_kcat_database.py
autopacmen/submodules/create_gecko_model_reaction_wise.py
autopacmen/submodules/create_smoment_model_reaction_wise.py
autopacmen/submodules/fva_comparison.py
autopacmen/submodules/fva_prot_pool.py
autopacmen/submodules/get_differential_reactions.py
autopacmen/submodules/get_initial_spreadsheets.py
autopacmen/submodules/get_protein_mass_mapping.py
autopacmen/submodules/get_reactions_kcat_mapping.py
autopacmen/submodules/helper_create_model.py
autopacmen/submodules/helper_general.py
autopacmen/submodules/kegg.py
autopacmen/submodules/ncbi_taxonomy.py
autopacmen/submodules/parse_bigg_metabolites_file.py
autopacmen/submodules/parse_brenda_json_for_model.py
autopacmen/submodules/parse_brenda_textfile.py
autopacmen/submodules/parse_sabio_rk.py
autopacmen/submodules/parse_sabio_rk_for_model.py
autopacmen/submodules/reaction_flux_control_by_scenario.py
autopacmen_Paulocracy.egg-info/PKG-INFO
autopacmen_Paulocracy.egg-info/SOURCES.txt
autopacmen_Paulocracy.egg-info/dependency_links.txt
autopacmen_Paulocracy.egg-info/requires.txt
autopacmen_Paulocracy.egg-info/top_level.txt