.gitignore
LICENSE
README.md
pyproject.toml
rebuild.sh
requirements.txt
setup.cfg
src/biclustlib/__init__.py
src/biclustlib/io.py
src/biclustlib/models.py
src/biclustlib.egg-info/PKG-INFO
src/biclustlib.egg-info/SOURCES.txt
src/biclustlib.egg-info/dependency_links.txt
src/biclustlib.egg-info/requires.txt
src/biclustlib.egg-info/top_level.txt
src/biclustlib/algorithms/__init__.py
src/biclustlib/algorithms/_base.py
src/biclustlib/algorithms/bcca.py
src/biclustlib/algorithms/bibit.py
src/biclustlib/algorithms/cca.py
src/biclustlib/algorithms/las.py
src/biclustlib/algorithms/plaid.py
src/biclustlib/algorithms/xmotifs.py
src/biclustlib/algorithms/wrappers/__init__.py
src/biclustlib/algorithms/wrappers/_base.py
src/biclustlib/algorithms/wrappers/_util.py
src/biclustlib/algorithms/wrappers/bbc.py
src/biclustlib/algorithms/wrappers/bimax.py
src/biclustlib/algorithms/wrappers/fabia.py
src/biclustlib/algorithms/wrappers/isa2.py
src/biclustlib/algorithms/wrappers/opsm.py
src/biclustlib/algorithms/wrappers/qubic.py
src/biclustlib/algorithms/wrappers/rbimax.py
src/biclustlib/algorithms/wrappers/rcca.py
src/biclustlib/algorithms/wrappers/rinclose.py
src/biclustlib/algorithms/wrappers/rplaid.py
src/biclustlib/algorithms/wrappers/spectral.py
src/biclustlib/algorithms/wrappers/xmotifs.py
src/biclustlib/algorithms/wrappers/bin/bbc/BBC
src/biclustlib/algorithms/wrappers/bin/bbc/LICENSE
src/biclustlib/algorithms/wrappers/bin/bimax/BiMax.tar.gz
src/biclustlib/algorithms/wrappers/bin/bimax/bimax
src/biclustlib/algorithms/wrappers/bin/qubic/qubic
src/biclustlib/algorithms/wrappers/bin/rinclose/RInClose
src/biclustlib/algorithms/wrappers/jar/opsm/LICENSE
src/biclustlib/algorithms/wrappers/jar/opsm/OPSM.jar
src/biclustlib/benchmark/__init__.py
src/biclustlib/benchmark/gene_expression.py
src/biclustlib/benchmark/data/__init__.py
src/biclustlib/benchmark/data/load.py
src/biclustlib/benchmark/data/prelic.csv
src/biclustlib/benchmark/data/tavazoie.csv
src/biclustlib/benchmark/data/jaskowiak/01_alpha_factor.csv
src/biclustlib/benchmark/data/jaskowiak/02_cdc_15.csv
src/biclustlib/benchmark/data/jaskowiak/03_cdc_28.csv
src/biclustlib/benchmark/data/jaskowiak/04_elutriation.csv
src/biclustlib/benchmark/data/jaskowiak/05_1mM_menadione.csv
src/biclustlib/benchmark/data/jaskowiak/06_1M_sorbitol.csv
src/biclustlib/benchmark/data/jaskowiak/07_15mM_diamide.csv
src/biclustlib/benchmark/data/jaskowiak/08_25mM_DTT.csv
src/biclustlib/benchmark/data/jaskowiak/09_constant_32nM_H2O2.csv
src/biclustlib/benchmark/data/jaskowiak/10_diauxic_shift.csv
src/biclustlib/benchmark/data/jaskowiak/11_complete_DTT.csv
src/biclustlib/benchmark/data/jaskowiak/12_heat_shock_1.csv
src/biclustlib/benchmark/data/jaskowiak/13_heat_shock_2.csv
src/biclustlib/benchmark/data/jaskowiak/14_nitrogen_depletion.csv
src/biclustlib/benchmark/data/jaskowiak/15_YPD_1.csv
src/biclustlib/benchmark/data/jaskowiak/16_YPD_2.csv
src/biclustlib/benchmark/data/jaskowiak/17_yeast_sporulation.csv
src/biclustlib/benchmark/util/__init__.py
src/biclustlib/benchmark/util/converter.py
src/biclustlib/benchmark/util/go-basic.obo
src/biclustlib/benchmark/util/sgd.gaf
src/biclustlib/benchmark/util/sgd.pop
src/biclustlib/datasets/__init__.py
src/biclustlib/datasets/load.py
src/biclustlib/datasets/data/cancer_benchmark/alizadeh-2000-v1_database.txt
src/biclustlib/datasets/data/cancer_benchmark/alizadeh-2000-v2_database.txt
src/biclustlib/datasets/data/cancer_benchmark/alizadeh-2000-v3_database.txt
src/biclustlib/datasets/data/cancer_benchmark/armstrong-2002-v1_database.txt
src/biclustlib/datasets/data/cancer_benchmark/armstrong-2002-v2_database.txt
src/biclustlib/datasets/data/cancer_benchmark/bhattacharjee-2001_database.txt
src/biclustlib/datasets/data/cancer_benchmark/bittner-2000_database.txt
src/biclustlib/datasets/data/cancer_benchmark/bredel-2005_database.txt
src/biclustlib/datasets/data/cancer_benchmark/chen-2002_database.txt
src/biclustlib/datasets/data/cancer_benchmark/chowdary-2006_database.txt
src/biclustlib/datasets/data/cancer_benchmark/dyrskjot-2003_database.txt
src/biclustlib/datasets/data/cancer_benchmark/garber-2001_database.txt
src/biclustlib/datasets/data/cancer_benchmark/golub-1999-v1_database.txt
src/biclustlib/datasets/data/cancer_benchmark/golub-1999-v2_database.txt
src/biclustlib/datasets/data/cancer_benchmark/gordon-2002_database.txt
src/biclustlib/datasets/data/cancer_benchmark/khan-2001_database.txt
src/biclustlib/datasets/data/cancer_benchmark/laiho-2007_database.txt
src/biclustlib/datasets/data/cancer_benchmark/lapointe-2004-v1_database.txt
src/biclustlib/datasets/data/cancer_benchmark/lapointe-2004-v2_database.txt
src/biclustlib/datasets/data/cancer_benchmark/liang-2005_database.txt
src/biclustlib/datasets/data/cancer_benchmark/nutt-2003-v1_database.txt
src/biclustlib/datasets/data/cancer_benchmark/nutt-2003-v2_database.txt
src/biclustlib/datasets/data/cancer_benchmark/nutt-2003-v3_database.txt
src/biclustlib/datasets/data/cancer_benchmark/pomeroy-2002-v1_database.txt
src/biclustlib/datasets/data/cancer_benchmark/pomeroy-2002-v2_database.txt
src/biclustlib/datasets/data/cancer_benchmark/ramaswamy-2001_database.txt
src/biclustlib/datasets/data/cancer_benchmark/risinger-2003_database.txt
src/biclustlib/datasets/data/cancer_benchmark/shipp-2002-v1_database.txt
src/biclustlib/datasets/data/cancer_benchmark/singh-2002_database.txt
src/biclustlib/datasets/data/cancer_benchmark/su-2001_database.txt
src/biclustlib/datasets/data/cancer_benchmark/tomlins-2006-v2_database.txt
src/biclustlib/datasets/data/cancer_benchmark/tomlins-2006_database.txt
src/biclustlib/datasets/data/cancer_benchmark/west-2001_database.txt
src/biclustlib/datasets/data/cancer_benchmark/yeoh-2002-v1_database.txt
src/biclustlib/datasets/data/cancer_benchmark/yeoh-2002-v2_database.txt
src/biclustlib/datasets/data/prelic/arabidopsis.txt
src/biclustlib/datasets/data/prelic/yeast.txt
src/biclustlib/datasets/data/yeast_benchmark/01_alpha_factor.csv
src/biclustlib/datasets/data/yeast_benchmark/02_cdc_15.csv
src/biclustlib/datasets/data/yeast_benchmark/03_cdc_28.csv
src/biclustlib/datasets/data/yeast_benchmark/04_elutriation.csv
src/biclustlib/datasets/data/yeast_benchmark/05_1mM_menadione.csv
src/biclustlib/datasets/data/yeast_benchmark/06_1M_sorbitol.csv
src/biclustlib/datasets/data/yeast_benchmark/07_15mM_diamide.csv
src/biclustlib/datasets/data/yeast_benchmark/08_25mM_DTT.csv
src/biclustlib/datasets/data/yeast_benchmark/09_constant_32nM_H2O2.csv
src/biclustlib/datasets/data/yeast_benchmark/10_diauxic_shift.csv
src/biclustlib/datasets/data/yeast_benchmark/11_complete_DTT.csv
src/biclustlib/datasets/data/yeast_benchmark/12_heat_shock_1.csv
src/biclustlib/datasets/data/yeast_benchmark/13_heat_shock_2.csv
src/biclustlib/datasets/data/yeast_benchmark/14_nitrogen_depletion.csv
src/biclustlib/datasets/data/yeast_benchmark/15_YPD_1.csv
src/biclustlib/datasets/data/yeast_benchmark/16_YPD_2.csv
src/biclustlib/datasets/data/yeast_benchmark/17_yeast_sporulation.csv
src/biclustlib/datasets/data/yeast_tavazoie/genes_yeast_tavazoie.txt
src/biclustlib/datasets/data/yeast_tavazoie/yeast_tavazoie.txt
src/biclustlib/evaluation/__init__.py
src/biclustlib/evaluation/goea.py
src/biclustlib/evaluation/internal.py
src/biclustlib/evaluation/external/__init__.py
src/biclustlib/evaluation/external/check.py
src/biclustlib/evaluation/external/csi.py
src/biclustlib/evaluation/external/liu_wang.py
src/biclustlib/evaluation/external/prelic.py
src/biclustlib/evaluation/external/subspace.py