Metadata-Version: 2.1
Name: CTPreprocessing
Version: 3.0.0
Summary: First preprocessing on input dicoms
Author: AIMedic
Author-email: aimedic@gmail.com
License: MIT
Requires-Python: >=3.7
Description-Content-Type: text/markdown
Requires-Dist: numpy
Requires-Dist: scipy
Requires-Dist: scikit-image
Requires-Dist: pydicom
Requires-Dist: simpleitk
Requires-Dist: matplotlib
Requires-Dist: opencv-python (>=4.5)
Provides-Extra: interactive
Requires-Dist: matplotlib (>=2.2.0) ; extra == 'interactive'
Requires-Dist: jupyter ; extra == 'interactive'

**_installation_**
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install the package:
~~~~
pip install CTPreprocessing
~~~~
**_HOW TO_**
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After the installation, do the following:
~~~~
from ctbrain_preprocessing import PreProcessor
from pathlib import Path

path = directory/to/ct series
preprocessor = PreProcessor()
preprocessed_series, headers = preprocessor.preprocess(path)
~~~~

**_Description_**
----------------------------------------------
This is the first preprocessing on the input dicoms.
the preprocessing consists of:

~~~~
1- removing artifacts
2- removing the neck slices
3- centering the image