[console_scripts]
bdg-adam = bdgenomics.workflows.adam_pipeline.preprocessing:main
bdg-avocado = bdgenomics.workflows.avocado_pipeline.variant_calling:main
bdg-bqsr-benchmark = bdgenomics.workflows.benchmarking.single_node.bqsr:main
bdg-cannoli-bwa = bdgenomics.workflows.cannoli_pipeline.bwa_alignment:main
bdg-deca = bdgenomics.workflows.deca_pipeline.call_cnvs:main
bdg-gatk3-benchmark = bdgenomics.workflows.benchmarking.gatk3_pipeline.preprocessing:main
bdg-mkdups-benchmark = bdgenomics.workflows.benchmarking.single_node.mkdups:main
bdg-ri-benchmark = bdgenomics.workflows.benchmarking.single_node.realign_indels:main
bdg-sort-benchmark = bdgenomics.workflows.benchmarking.single_node.sort:main

